Differential methylation patterns from clusters associated with glucose metabolism: evidence from a Shanghai twin study

Jingyuan Feng,Zhenni Zhu, Rongfei Zhou, Hongwei Liu, Zihan Hu, Fei Wu, Huiting Wang, Junhong Yue, Tong Zhou, Li Yang,Fan Wu

EPIGENOMICS(2024)

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摘要
Aim: To assess the associations between genome-wide DNA methylation (DNAm) and glucose metabolism among a Chinese population, in particular the multisite correlation. Materials & methods: Epigenome-wide associations with fasting plasma glucose (FPG) and hemoglobin A1c (HbA1c) were analyzed among 100 Shanghai monozygotic (MZ) twin pairs using the Infinium HumanMethylationEPIC v2.0 BeadChip. We conducted a Pearson's correlation test, hierarchical cluster and pairwise analysis to examine the differential methylation patterns from clusters. Results: Cg01358804 (TXNIP) was identified as the most significant site associated with FPG and HbA1c. Two clusters with hypermethylated and hypomethylated patterns were observed for both FPG and HbA1c. Conclusion: Differential methylation patterns from clusters may provide new clues for epigenetic changes and biological mechanisms in glucose metabolism. Hypomethylated cg01358804 (TXNIP) may be a novel marker related to FPG and HbA1c in a Chinese population. Differential methylation patterns from clusters contribute to regulation of glucose metabolism.
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关键词
diabetes,DNA methylation,epigenomics,glucose metabolism,twin study
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