Formicincola oecophyllae gen. nov. sp. nov., a novel member of the family Acetobacteraceae isolated from the weaver ant Oecophylla smaragdina

Antonie van Leeuwenhoek(2022)

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摘要
In this study, a novel bacterium designated F3b2 T was isolated from the gut sample of weaver ant Oecophylla smaragdina and characterised. Strain F3b2 T was a Gram-negative, aerobic, non-motile, ovoid-shaped bacterium and grows optimally at 28–30 °C. Its major respiratory quinone is ubiquinone 10 (Q-10) and the major fatty acids are C 18:1 ω 7 c , C 19:0 cyclo ω 8 c and C 16:0 , representing 85% of the total fatty acids. The 16S rRNA gene sequence of strain F3b2 T was highest in similarity to that of Oecophyllibacter saccharovorans DSM106907 T and Swingsia samuieinsis NBRC 107927 T at 94.35% and 91.96%, respectively. A 16S rRNA gene-based phylogenetic analysis and a core genes-based phylogenomic analysis placed strain F3b2 T in a distinct lineage in the family Acetobacteraceae . The phylogenetic placement was supported by lower than species delineation threshold average nucleotide identity (ANI) (≤ 70.2%), in silico DNA-DNA hybridization (DDH) (≤ 39.5%) and average amino acid identity (AAI) (≤ 63.5%) values between strain F3b2 T and closest neighbours. These overall genome relatedness indices also supported the assignment of strain F3b2 T to a novel genus within Acetobacteraceae . The genome of strain F3b2 T was 1.96 Mb with 60.4% G + C DNA content. Based on these results, strain F3b2 T represented a novel taxon of Acetobacteraceae , for which we proposed the name Formicincola oecophyllae gen. nov. sp. nov., and strain F3b2 T (= LMG 30590 T = DSM 106908 T = NBRC 113640 T = KCTC 62951 T ) as the type strain.
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关键词
Asian weaver ant,Symbiotic bacterium,Insect,Polyphasic taxonomy,Rhodospirillales
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