Benchmarking GE-BOLD, SE-BOLD, and SS-SI-VASO sequences for depth-dependent separation of feedforward and feedback signals in high-field MRI

Recent advances in high-field fMRI have allowed differentiating feedforward and feedback information in the grey matter of the human brain. For continued progress in this endeavor, it is critical to understand how MRI data acquisition parameters impact the read-out of information from laminar response profiles. Here, we benchmarked three different MR-sequences at 7T - gradient-echo (GE), spin-echo (SE) and vascular space occupancy imaging (VASO) - in differentiating feedforward and feedback signals in human early visual cortex (V1). The experiment (N=4) consisted of two complementary tasks: a perception task that predominantly evokes feedforward signals and a working memory task that relies on feedback signals. In the perception task, participants saw flickering oriented gratings while detecting orthogonal color-changes. In the working memory task, participants memorized the precise orientation of a grating. We used multivariate pattern analysis to read out the perceived (feedforward) and memorized (feedback) grating orientation from neural signals across cortical depth. Analyses across all the MR-sequences revealed perception signals predominantly in the middle cortical compartment of area V1 and working memory signals in the deep compartment. Despite an overall consistency across sequences, SE-EPI was the only sequence where both feedforward and feedback information were differently pronounced across cortical depth in a statistically robust way. We therefore suggest that in the context of a typical cognitive neuroscience experiment as the one benchmarked here, SE-EPI may provide a favorable trade-off between spatial specificity and signal sensitivity. ### Competing Interest Statement The Max Planck Institute for Human Cognitive and Brain Sciences has an institutional research agreement with Siemens Healthcare. NW holds a patent on acquisition of MRI data during spoiler gradients (US 10,401,453 B2). NW was a speaker at an event organized by Siemens Healthcare and was reimbursed for the travel expenses.