Deep Learning for Detecting and Early Predicting Chronic Obstructive Pulmonary Disease from Spirogram Time Series: A UK Biobank Study
arxiv(2024)
摘要
Chronic Obstructive Pulmonary Disease (COPD) is a chronic inflammatory lung
condition that causes airflow obstruction. The existing methods can only detect
patients who already have COPD based on obvious features shown in the spirogram
(In this article, the spirogram specifically involves measuring Volume-Flow
curve time series). Early prediction of COPD risk is vital for monitoring COPD
disease progression, slowing it down, or even preventing its onset. However,
these methods fail to early predict an individual's probability of COPD in the
future based on subtle features in the spirogram. To address this gap, for the
first time, we propose DeepSpiro, a method based on deep learning for early
prediction of future COPD risk. DeepSpiro consists of four parts. First, we
construct Volume-Flow curves guided by Time-Volume instability smoothing
(SpiroSmoother) to enhance the stability of the original Volume-Flow curves
precisely. Second, we extract critical features from the evolution of
varied-length key patches (SpiroEncoder) to capture the key temporal evolution
from original high-dimensional dynamic sequences to a unified low-dimensional
temporal representation. Third, we explain the model based on temporal
attention and heterogeneous feature fusion (SpiroExplainer), which integrates
information from heterogeneous data such as spirogram and demographic
information. Fourth, we predict the risk of COPD based on the evolution of key
patch concavity (SpiroPredictor), enabling accurate prediction of the risk of
disease in high-risk patients who are not yet diagnosed, for up to 1, 2, 3, 4,
5 years, and beyond. We conduct experiments on the UK Biobank dataset. Results
show that DeepSpiro achieves an AUC value of 0.8328 in the task of detecting
COPD. In early prediction tasks, high-risk and low-risk groups show significant
differences in the future, with a p-value of <0.001.
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