Identification of PC4 as a diagnostic and prognostic biomarker associated with immune infiltration in hepatocellular carcinoma

Liangliang Bai, Lina Guan,Gang Dou,Xianli He, Gong Cheng, Hongbin Zhang, Kai Tsuiki,Xilin Du

iLIVER(2023)

引用 0|浏览4
暂无评分
摘要
Human positive cofactor 4 (PC4) is associated with the development and therapeutic resistance of several malignancies. However, the role of PC4 in hepatocellular carcinoma (HCC) remains obscure. The expression status of PC4 was explored in Gene Expression Omnibus and The Cancer Genome Atlas datasets. Subsequently, the prognostic and diagnostic significance of PC4 in HCC patients was analyzed. Functional enrichment analyses were conducted to explore biological functions and potential mechanisms. The CIBERSORT algorithm was used for immune infiltration analysis. The risk signature was constructed by LASSO-COX regression and validated with the International Cancer Genome Consortium dataset. qRT-PCR was used to verify the expression levels of all genes. Tumor Immune Dysfunction and Exclusion (TIDE) analysis evaluated immunotherapy response. Finally, using online databases, PC4-related competing endogenous RNA (ceRNA) networks were constructed. PC4 levels were significantly upregulated in HCC and positively correlated with the pathological grade and clinical stage. The PC4-high expression group showed worse prognosis. In addition, PC4 could distinguish between tumor and normal tissues with an area under the curve of 0.965. The PC4 level was associated with immune checkpoints and immune cell infiltration. In the training and validation sets, the eight-gene risk signature strongly correlated with HCC patient prognosis. TIDE analysis showed that patients in both the PC4-low and low-risk groups were more likely to benefit from immunotherapy. Finally, an lncRNA/miRNA-101-3p/PC4 network was constructed. We confirmed PC4 as a diagnostic and prognostic biomarker in HCC patients. We also developed and validated an eight-gene risk signature, which will help in clinical decision-making. The ceRNA network could help explore the regulatory mechanisms of PC4 in HCC.
更多
查看译文
关键词
hepatocellular carcinoma,pc4,prognostic biomarker,immune infiltration
AI 理解论文
溯源树
样例
生成溯源树,研究论文发展脉络
Chat Paper
正在生成论文摘要