CL-Impute: A contrastive learning-based imputation for dropout single-cell RNA-seq data

Computers in biology and medicine(2023)

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摘要
•An approach to recover missing genes due to dropout events on scRNA-seq data.•CL-Impute can learn cell features from self- and global-perspective, respectively.•CL-Impute outperforms other methods in downstream analysis of scRNA-seq data.•Demonstrate excellent performance in the context of high dropout rates.•CL-Impute can explore the nondropout cell features by receiving dropout inputs.
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关键词
scRNA-seq,Imputation,Dropout events,Downstream analysis,Contrastive learning
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