Potential of publicly available Beta vulgaris germplasm for sustainable sugarbeet improvement indicated by combining analysis of genetic diversity and historic resistance evaluation

Sugar beet (Beta vulgaris L. ssp. vulgaris Doell.) was originally selected from white fodder beet in the 1780s and was then specifically bred for sucrose production. The relatively recent inception of the crop has led to a narrow genetic base that has bottlenecked sustainable improvement. To evaluate the potential of publicly available germplasm for sugar beet improvement, genetic diversity analysis with SNPs (single-nucleotide polymorphisms) covering the whole genome of sugar beet was conducted using 1936 publicly available germplasm lines in the United States. The results confirmed the narrow genetic base of sugar beet and identified germplasm accessions with inherently greater diversity that were mostly accessions of wild sea beet (B. vulgaris ssp. maritima (L.) Arcang.), the progenitor species of white fodder beet. These wild accessions displayed a distinct genetic relationship from cultivated sugar beet lines, indicating their high potential for broadening sugar beet genetic diversity. Analysis of historic resistance evaluations also suggested a higher potential of B. vulgaris ssp. maritima accessions to be used as sources of resistance to major diseases and insects of sugar beet. A genome-wide association study using historic evaluation data identified genomic regions significantly associated with disease and insect resistance. However, genomic regions associated with resistance to nematode, insects, or diseases vectored by insects were of low significance, indicating the need for additional research to allow for a more precise evaluation of germplasm responses to insects. The research confirms that accessions of B. vulgaris ssp. maritima are potentially valuable for improving biotic stress resistance and broadening the genetic base of sugar beet.