Decoding the Fucose Migration Product during Mass-Spectrometric Analysis of Blood Group Epitopes.

Angewandte Chemie (International ed. in English)(2023)

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摘要
Fucose is a signaling carbohydrate that is attached at the end of glycan processing. It is involved in a range of processes, such as the selectin-dependent leukocyte adhesion or pathogen-receptor interactions. Mass-spectrometric techniques, which are commonly used to determine the structure of glycans, frequently show fucose-containing chimeric fragments that obfuscate the analysis. The rearrangement leading to these fragments - often referred to as fucose migration - has been known for more than 25 years, but the chemical identity of the rearrangement product remains unclear. In this work, we combine ion-mobility spectrometry, radical-directed dissociation mass spectrometry, cryogenic-ion IR spectroscopy, and density-functional theory calculations to deduce the product of the rearrangement in the model trisaccharides Lewis x and blood group H2. The structural search yields the fucose moiety attached to the galactose with an α(1 → 6) glycosidic bond as the most likely product.
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关键词
gas-phase IR spectroscopy,glycomics,internal residue loss,ion mobility spectrometry,molecular modeling
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