Whole genome analysis of Gram-negative bacteria using the EPISEQ CS application and other bioinformatic platforms. Ulises Garza-Ramos , Nadia Rodríguez-Medina , Carlos Córdova-Fletes , Daira Rubio-Mendoza , Christopher J Alonso-Hernández , Luis Esaú López-Jácome , Rao Morfín-Otero , Eduardo Rodríguez-Noriega , Fabián Rojas-Larios , María Del Rosario Vázquez-Larios , Alfredo Ponce-de-Leon , Elena Victoria Choy-Chang , Rafael Franco-Cendejas , Bernardo Alfonso Martinez-Guerra , Cecilia Teresita Morales-de-La-Peña , Juan Pablo Mena-Ramírez , Eduardo López-Gutiérrez , Ricardo García-Romo , Bertha Ballesteros-Silva , Alejandro Valadez-Quiroz , Laura Karina Avilés-Benítez , José Manuel Feliciano-Guzmán , Talia Pérez-Vicelis , María Del Consuelo Velázquez-Acosta , Cecilia Padilla-Ibarra , Laura Isabel López-Moreno , Reyna Edith Corte-Rojas , Carlos Antonio Couoh-May , María Angelina Quevedo-Ramos , Maribel López-García , Gabriela Chio-Ortiz , Mariana Gil-Veloz , Alejandro Molina-Chavarria , Javier Paul Mora-Domínguez , Daniel Romero-Romero , Francisco Javier May-Tec , Elvira Garza-González Journal of global antimicrobial resistance（2023）
摘要
Compared to the other available platforms, EPISEQ CS enabled a comprehensive resistance and virulence analysis, providing a reliable method for bacterial strain typing and characterization of the virulome and resistome.
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关键词
Carbapenem resistance, Drug resistance, EPISEQ, Pathogenwatch, Whole genome sequencing
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