In Situ HiC.

Methods in molecular biology (Clifton, N.J.)(2022)

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摘要
In situ HiC uses the relative frequency of DNA-DNA ligation events to reconstruct the three-dimensional architecture of a genome. As such, restriction enzyme digested ends of genomic DNA within fixed nuclei are tagged with biotinylated dNTPs. DNA-DNA ligation events generated via proximity ligation are then captured, amplified and next generation sequenced to determine their linear genomic position, but also their three-dimensional relationship. Here, we describe these steps in detail.
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关键词
Chromatin architecture,Chromosome conformation capture,Genome organization,In situ HiC
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