Modelling virus contact mechanics under atomic force imaging conditions

In this paper, we present a discrete model governing the deformation of a convex regular polygon subjected not to cross a given flat rigid surface, on which it initially lies in correspondence of one point only. First, we set up the model in the form of a set of variational inequalities posed over a non-empty, closed and convex subset of a suitable Euclidean space. Second, we show the existence and uniqueness of the solution. The model provides a simplified illustration of processes involved in virus imaging by atomic force microscopy: adhesion to a surface, distributed strain, relaxation to a shape that balances adhesion and elastic forces. The analysis of numerical simulations results based on this model opens a new way of estimating the contact area and elastic parameters in virus contact mechanics studies.