Decoding the porcine developing spatial processing system and production of human entorhinal stellate cell-like cells by a direct programming approach
biorxiv(2021)
摘要
Classic studies investigating how and when the entorhinal cortex (component of the memory processing system of the brain) develops have been based on traditional thymidine autoradiography and histological techniques. In this study, we take advantage of modern technologies to trace at a high resolution, the cellular complexity of the developing porcine medial entorhinal cortex by using single-cell profiling. The postnatal medial entorhinal cortex comprises 4 interneuron, 3 pyramidal neuron and 2 stellate cell populations which emerge from intermediate progenitor and immature neuron populations. We discover four MGE-derived interneurons and one CGE-derived interneuron population as well as several IN progenitors. We also identify two oligodendrocyte progenitor populations and three populations of oligodendrocytes. We perform a proof-of-concept experiment demonstrating that porcine scRNA-seq data can be used to develop novel protocols for producing human entorhinal cells in-vitro. We identified six transcription factors ( RUNX1A1, SOX5, FOXP1, MEF2C, TCF4, EYA2 ) important in neurodevelopment and differentiation from one RELN + stellate cell population. Using a lentiviral vector approach, we reprogrammed human induced pluripotent stem cells into stellate cell-like cells which expressed RELN, SATB2, LEF1 and BCL11B. Our findings contribute to the understanding of the formation of the brain’s cognitive memory and spatial processing system and provides proof-of-concept for the production of entorhinal cells from human pluripotent stem cells in-vitro.
### Competing Interest Statement
The authors have declared no competing interest.
* BMP
: bone morphogenetic protein
CHIR
: GSK-3α/β inhibitor
CNS
: central nervous system
D
: Day
DMEM
: dulbecco’s modified eagle’s medium
E
: Embryonic day
EC
: entorhinal cortex
EDTA
: Ethylenediaminetetraacetic acid
gDNA
: genomic DNA
GOI
: gene of interest
h
: hours
iPSC
: induced pluripotent stem cells
IN
: interneurons
IP
: intermediate progenitor
L
: layer
LV
: lentivirus
LEC
: lateral entorhinal cortex
MEC
: medial entorhinal cortex
MOI
: multiplicity of infection
OPC
: oligodendrocyte progenitor cell
P
: postnatal day
PBS
: phosphate-buffered saline
PCR
: polymerase chain reaction
PYR
: pyramidal neuron
qPCR
: quantitative real time PCR
RELN
: Reelin gene
RT
: room temperature
scRNA-seq
: Single-cell RNA sequencing
SC
: stellate cell
SD
: standard deviation
SPE
: speed cell
SST
: somatostatin
TF
: transcription factor
U
: units of viral particles
UMI
: unique molecular identifier
VPD
: volume of produced virus
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