Trans-ethnic variation in germline variants of patients with renal cell carcinoma.

Sarah Abou Alaiwi,Amin H Nassar, Elio Adib,Stefan M Groha, Elie W Akl,Bradley A McGregor, Edward D Esplin,Shan Yang, Kathryn Hatchell,Vincent Fusaro, Sarah Nielsen,David J Kwiatkowski, Guru P Sonpavde,Mark Pomerantz,Judy E Garber, Matthew L Freedman,Huma Q Rana, Alexander Gusev,Toni K Choueiri

Cell reports(2021)

引用 11|浏览5
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摘要
Prior studies of the renal cell carcinoma (RCC) germline landscape investigated predominantly patients of European ancestry. We examine the frequency of germline pathogenic and likely pathogenic (P/LP) variants in 1,829 patients with RCC from various ancestries. Overall, P/LP variants are found in 17% of patients, among whom 10.3% harbor one or more clinically actionable variants with potential preventive or therapeutic utility. Patients of African ancestry with RCC harbor significantly more P/LP variants in FH compared to patients of non-African ancestry with RCC and African controls from the Genome Aggregation Database (gnomAD). Patients of non-African ancestry have significantly more P/LP variants in CHEK2 compared to patients of African ancestry with RCC and non-Finnish Europeans controls. Non-Africans with RCC have more actionable variants compared to Africans with RCC. This work helps understand the underlying biological differences in RCC between Africans and non-Africans and paves the way to more comprehensive genomic characterization of underrepresented populations.
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