Bioinformatics Application with Kubeflow for Batch Processing in Clouds.

ISC Workshops(2020)

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摘要
Bioinformatics pipelines make extensive use of HPC batch processing. The rapid growth of data volumes and computational complexity, especially for modern applications such as machine learning algorithms, imposes significant challenges to local HPC facilities. Many attempts have been made to burst HPC batch processing into clouds with virtual machines. They all suffer from some common issues, for example: very high overhead, slow to scale up and slow to scale down, and nearly impossible to be cloud-agnostic.
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关键词
batch processing,kubeflow,clouds
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