"Colonisation routes and demographic history of Chirostoma humboldtianum in the Central Mexican Plateau".
JOURNAL OF FISH BIOLOGY(2020)
摘要
In the present study we evaluate the population structure and potential colonization routes of the silversideChirostoma humboldtianumthrough approximate Bayesian computations.Six microsatellite loci were amplified in a total of 288 individuals from six different locations covering the complete geographic distribution of the species. Additionally, two mitochondrial DNA markers, a D loop control region and cytochrome b were amplified in a subset of 107 individuals. The results found with microsatellites allow recovering well-structured populations that have experienced a drastic reduction in the effective population size. On the other hand, mtDNA sequences showed a moderate phylogeographic structure with shared haplotypes between geographic localities and signalsof a slight increase in the effective population size. Finally, the approximate Bayesian computation analysis performed with both datasets suggested a west-to-east colonization route for the species in Central Mexico.
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关键词
approximate Bayesian computation,Bayesian skyline plot (BSP),bottleneck,MSVAR
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