Identification Of Key Lncrnas As Prognostic Prediction Models For Colorectal Cancer Based On Lasso

INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL PATHOLOGY(2020)

引用 8|浏览5
暂无评分
摘要
Colorectal cancer (CRC) is one of the most common malignancies, with varying prognoses and a high mortality. There is an urgent need to establish a new prediction model to predict the survival risk of CRC patients. The long non-coding RNAs (IncRNAs) expression profiles and corresponding clinical information of CRC patients were obtained from The Cancer Genome Atlas, TCGA. We identified a total of 1,176 IncRNAs differentially expressed between 480 CRC and 41 normal tissues. In the training test, we combined these differentially expressed IncRNAs with overall survival of CRC patients. Six IncRNAs (AL356270.1, LINCO2257, AC020891.2, LINC01485, AC083967.1 and RBAKDN) were finally screened out by using LASSO regression mode to establish a novel prediction model as a prognostic indicator for CRC patients. The area under the curve (AUC) of 3- and 5-year ROC analysis in CRC were 0.6923 and 0.7328 for training set, and were 0.6803 and 0.7035 for testing set, respectively. K-M analysis revealed a significant difference between high risk and low risk in the training set (P value = 5.0e -05) and testing set (P-value = 0.00052), respectively. Our study shows that the six IncRNAs model can improve the survival prediction mechanism of patients with CRC and provide help for patients through personalized treatment.
更多
查看译文
关键词
CRC, overall survival, lncRNAs, LASSO regression
AI 理解论文
溯源树
样例
生成溯源树,研究论文发展脉络
Chat Paper
正在生成论文摘要