Efficient Compression and Indexing for Highly Repetitive DNA Sequence Collections

Hongwei Huo,Xiaoyang Chen,Xu Guo,Jeffrey S Vitter

IEEE/ACM Transactions on Computational Biology and Bioinformatics（2021）

引用 4|浏览37

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摘要

In this paper, we focus upon the important problem of indexing and searching highly repetitive DNA sequence collections. Given a collection $\mathcal {G}$G更多

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关键词

DNA,Indexing,Sequential analysis,Dynamic programming,Data structures

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