Online resources for PCAWG data exploration, visualization, and discovery

Mary Goldman,Junjun Zhang,Nuno A. Fonseca, Xiang Q,Brian Craft, Pineiro E,Brian O'Connor,Wojciech Bażant,Elisabet Barrera, Munoz A,Robert Petryszak, Fuellgrabe A,Al-Shahrour F,Maria Keays,David Haussler,John N. Weinstein,Wolfgang Huber,Valencia A,Irene Papatheodorou,Jingchun Zhu, Ferreti,Vazquez M

bioRxiv（2020）

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摘要

The Pan-Cancer Analysis of Whole Genomes (PCAWG) cohort provides a large, uniformly-analyzed, whole-genome dataset. The PCAWG Landing Page (http://docs.icgc.org/pcawg) focuses on four biologist-friendly, publicly-available web tools for exploring this data: The ICGC Data Portal, UCSC Xena, Expression Atlas, and PCAWG-Scout. They enable researchers to dynamically query the complex genomics data, explore tumors9 molecular landscapes, and include external information to facilitate interpretation.

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