A database for the taxonomic and phylogenetic identification of the genus Bradyrhizobium using multilocus sequence analysis
BMC genomics(2015)
摘要
A database for the taxonomic and phylogenetic identification of the Bradyrhizobium, genus, using MLSA, will facilitate the use of biological data available through an intuitive web interface. Sequences stored in the on-line database can be compared with multiple sequences of other strains with simplicity and agility through multiple alignment algorithms and computational routines integrated into the database. The proposed database and software tools are available at http://mlsa.cnpso.embrapa.br, and can be used, free of charge, by researchers worldwide to classify Bradyrhizobium, strains; the database and software can be applied to replicate the experiments presented in this study as well as to generate new experiments. The next step will be expansion of the database to include other rhizobial species.
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关键词
Bradyrhizobium database, Taxonomic of Prokaryotes, Phylogeny of Prokaryotes, Multilocus Sequence Analysis, 16S rRNA Gene, Bioinformatics, Pattern Recognition
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