A mathematical model to study the dynamics of epithelial cellular networks.

IEEE/ACM Trans. Comput. Biology Bioinform.(2012)

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摘要
Epithelia are sheets of connected cells that are essential across the animal kingdom. Experimental observations suggest that the dynamical behavior of many single-layered epithelial tissues has strong analogies with that of specific mechanical systems, namely large networks consisting of point masses connected through spring-damper elements and undergoing the influence of active and dissipating forces. Based on this analogy, this work develops a modeling framework to enable the study of the mechanical properties and of the dynamic behavior of large epithelial cellular networks. The model is built first by creating a network topology that is extracted from the actual cellular geometry as obtained from experiments, then by associating a mechanical structure and dynamics to the network via spring-damper elements. This scalable approach enables running simulations of large network dynamics: the derived modeling framework in particular is predisposed to be tailored to study general dynamics (for example, morphogenesis) of various classes of single-layered epithelial cellular networks. In this contribution, we test the model on a case study of the dorsal epithelium of the Drosophila melanogaster embryo during early dorsal closure (and, less conspicuously, germband retraction).
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关键词
mechanical property,large epithelial cellular network,large network,mathematical model,network topology,single-layered epithelial cellular network,epithelial cellular networks,mechanical structure,case study,spring-damper element,actual cellular geometry,large network dynamic,computer simulation,computational biology,epithelium,mechanical systems,morphogenesis,computational modeling,zoology,algorithms,discrete element method,cellular network,finite element methods,elasticity,biomechanics
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