Automating Three-Dimensional Reconstruction of Icosahedral Virus Structure with Condensed Graphs
Lisbon（2009）
摘要
We present a visual executable workflow for the three-dimensional reconstruction of icosahedral virus structure using the traditional model (TM) method. This workflow is implemented using WebCom, a metacomputer platform based on the condensed graph (CG) model. The CG model allows the application to be constructed with a structure that closely mirrors an abstract description of the workflow. By utilising WebCom's integrated development environment, we also create a workbench environment that facilitates construction of related workflows through the reuse of components developed for the TM workflow. As an example of this component reuse, we outline the construction of a workflow for the alternative unbiased model reconstruction method.
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关键词
unbiased model reconstruction,facilitates construction,model reconstruction method,three-dimensional reconstruction,cg model,three-dimensional icosahedral virus structure reconstruction,microorganisms,virus structure,automating three-dimensional reconstruction,icosahedral virus structure,component reuse,tm workflow,utilising webcom,webcom,biology computing,webcom integrated development environment,workflow,visual executable workflow,condensed graph model,internet,3d reconstruction,graph theory,traditional model,high performance computing,condensed graph,condensed graphs,traditional model method,computational modeling,solid modeling,java,image resolution,construction industry
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