Xian Fan - Department of Computer Science, Rice University

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论文共 23 篇作者统计合作学者相似作者

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A Robust Benchmark for Detection of Germline Large Deletions and Insertions

Nature Biotechnology（2020）

引用194浏览0WOSNATURE引用

194

Author Correction: A Robust Benchmark for Detection of Germline Large Deletions and Insertions

Nature Biotechnologyno. 11 (2020): 1347-1355

引用1浏览0WOSNATURE引用

A Robust Benchmark for Germline Structural Variant Detection

bioRxiv（2019）

引用41浏览0引用

Detecting Large Indels Using Optical Map Data

Xian Fan, Jie Xu,Luay Nakhleh

Comparative Genomics Lecture Notes in Computer Science（2018）

引用5浏览0EI引用

HySA: A Hybrid Structural Variant Assembly Approach Using Next Generation and Single-Molecule Sequencing Technologies

Xian Fan,Mark Chaisson,Luay Nakhleh,Ken Chen

Genome Research（2017）

引用26浏览0WOS引用

BreakPoint Surveyor: a Pipeline for Structural Variant Visualization

Matthew A. Wyczalkowski,Kristine M. Wylie,Song Cao,Michael D. McLellan,Jennifer Flynn,Mo Huang,Kai Ye,Xian Fan,Ken Chen,Michael C. Wendl,Li Ding

Bioinformatics（2017）

引用5浏览0EIWOS引用

Multi-platform Discovery of Haplotype-Resolved Structural Variation in Human Genomes

Mark J. P. Chaisson,Ashley D. Sanders,Xuefang Zhao,Ankit Malhotra,David Porubsky,Tobias Rausch,Eugene J. Gardner,Oscar L. Rodriguez,Li Guo,Ryan L. Collins,Xian Fan,Jia Wen,Robert E. Handsaker,Susan Fairley,Zev N. Kronenberg,Xiangmeng Kong,Fereydoun Hormozdiari,Dillon Lee,Aaron M. Wenger,Alex R. Hastie,Danny Antaki,Thomas Anantharaman,Peter A. Audano,Harrison Brand,Stuart Cantsilieris,Han Cao,Eliza Cerveira,Chong Chen,Xintong Chen,Chen-Shan Chin,Zechen Chong,Nelson T. Chuang,Christine C. Lambert,Deanna M. Church,Laura Clarke,Andrew Farrell, Joey Flores,Timur Galeev,David U. Gorkin,Madhusudan Gujral,Victor Guryev,William Haynes Heaton,Jonas Korlach,Sushant Kumar,Jee Young Kwon,Ernest T. Lam,Jong Eun Lee,Joyce Lee,Wan-Ping Lee, Sau Peng Lee,Shantao Li,Patrick Marks,Karine Viaud-Martinez,Sascha Meiers,Katherine M. Munson,Fabio C. P. Navarro,Bradley J. Nelson,Conor Nodzak,Amina Noor,Sofia Kyriazopoulou-Panagiotopoulou,Andy W. C. Pang,Yunjiang Qiu, Gabriel Rosanio,Mallory Ryan,Adrian Stütz,Diana C. J. Spierings,Alistair Ward,AnneMarie E. Welch,Ming Xiao,Wei Xu,Chengsheng Zhang,Qihui Zhu,Xiangqun Zheng-Bradley,Ernesto Lowy,Sergei Yakneen,Steven McCarroll,Goo Jun,Li Ding,Chong Lek Koh,Bing Ren,Paul Flicek,Ken Chen,Mark B. Gerstein,Pui-Yan Kwok,Peter M. Lansdorp,Gabor T. Marth,Jonathan Sebat,Xinghua Shi,Ali Bashir,Kai Ye,Scott E. Devine,Michael E. Talkowski,Ryan E. Mills,Tobias Marschall,Jan O. Korbel,Evan E. Eichler,Charles Lee

bioRxiv（2017）

引用604浏览0WOSNATURE引用

604

Novobreak: Local Assembly for Breakpoint Detection in Cancer Genomes

Zechen Chong,Jue Ruan,Min Gao,Wanding Zhou,Tenghui Chen,Xian Fan,Li Ding,Anna Y Lee,Paul Boutros, Junjie Chen,Ken Chen

Nature Methods（2016）

引用79浏览0WOSNATURE引用

Genome Modeling System: A Knowledge Management Platform for Genomics

Malachi Griffith,Obi L. Griffith,Scott M. Smith,Avinash Ramu,Matthew B. Callaway,Anthony M. Brummett, Michael J. Kiwala,Adam C. Coffman,Allison A. Regier, Ben J. Oberkfell,Gabriel E. Sanderson, Thomas P. Mooney, Nathaniel G. Nutter, Edward A. Belter,Feiyu Du, Robert L. Long,Travis E. Abbott,Ian T. Ferguson, David L. Morton,Mark M. Burnett, James V. Weible,Joshua B. Peck,Adam Dukes,Joshua F. McMichael, Justin T. Lolofie, Brian R. Derickson,Jasreet Hundal,Zachary L. Skidmore,Benjamin J. Ainscough,Nathan D. Dees, William S. Schierding,Cyriac Kandoth,Kyung H. Kim,Charles Lu,Christopher C. Harris, Nicole Maher,Christopher A. Maher,Vincent J. Magrini,Benjamin S. Abbott,Ken Chen,Eric Clark,Indraniel Das,Xian Fan, Amy E. Hawkins,Todd G. Hepler,Todd N. Wylie,Shawn M. Leonard, William E. Schroeder,Xiaoqi Shi,Lynn K. Carmichael, Matthew R. Weil, Richard W. Wohlstadter, Gary Stiehr,Michael D. McLellan,Craig S. Pohl,Christopher A. Miller,Daniel C. Koboldt,Jason R. Walker,James M. Eldred,David E. Larson,David J. Dooling,Li Ding,Elaine R. Mardis,Richard K. Wilson

PLoS Computational Biology（2015）

引用81浏览0WOSEI引用

An Integrated Map of Structural Variation in 2,504 Human Genomes

Peter H. Sudmant,Tobias Rausch,Eugene J. Gardner,Robert E. Handsaker,Alexej Abyzov,John Huddleston,Yan Zhang,Kai Ye,Goo Jun,Markus Hsi-Yang Fritz,Miriam K. Konkel,Ankit Malhotra,Adrian M. Stütz,Xinghua Shi,Francesco Paolo Casale,Jieming Chen,Fereydoun Hormozdiari,Gargi Dayama,Ken Chen,Maika Malig,Mark J. P. Chaisson,Klaudia Walter,Sascha Meiers,Seva Kashin,Erik Garrison,Adam Auton,Hugo Y. K. Lam,Xinmeng Jasmine Mu,Can Alkan,Danny Antaki,Taejeong Bae,Eliza Cerveira,Peter Chines,Zechen Chong,Laura Clarke,Elif Dal,Li Ding,Sarah Emery,Xian Fan,Madhusudan Gujral,Fatma Kahveci,Jeffrey M. Kidd,Yu Kong,Eric-Wubbo Lameijer,Shane McCarthy,Paul Flicek,Richard A. Gibbs,Gabor Marth,Christopher E. Mason,Androniki Menelaou,Donna M. Muzny,Bradley J. Nelson,Amina Noor,Nicholas F. Parrish,Matthew Pendleton,Andrew Quitadamo,Benjamin Raeder,Eric E. Schadt,Mallory Romanovitch,Andreas Schlattl,Robert Sebra,Andrey A. Shabalin,Andreas Untergasser,Jerilyn A. Walker,Min Wang,Fuli Yu,Chengsheng Zhang,Jing Zhang,Xiangqun Zheng-Bradley,Wanding Zhou,Thomas Zichner,Jonathan Sebat,Mark A. Batzer,Steven A. McCarroll,Ryan E. Mills,Mark B. Gerstein,Ali Bashir,Oliver Stegle,Scott E. Devine,Charles Lee,Evan E. Eichler,Jan O. Korbel

Nature（2015）

引用2620浏览0WOSNATURE引用

2620

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