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个人简介
Professor Bafna is an expert in bioinformatics. He has published on many aspects of this emerging field, including genome rearrangements, multiple alignments, RNA structure, gene finding, DNA signals, mass spectrometric data analysis, and human population genetics. In genome rearrangement, he introduced (with his then-advisor and now UCSD colleague Pavel Pevzner) the breakpoint graph technique that is now commonly used when doing computational analysis of genome rearrangements. In computational proteomics, Bafna made key contributions to the problem of protein identification by devising a scoring function that incorporates ion fragmentation probability as well as instrument error, and an efficient algorithm to compute that score. He led a team at Celera that built a toolkit for identifying and quantitfying the Proteome using mass spectrometry.
研究兴趣
论文共 292 篇作者统计合作学者相似作者
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Rishaan Kenkre,Owen Chapman,Jens Luebeck,Vineet Bafna,Robert Wechsler-Reya,Jill Mesirov,Lukas Chavez
Cancer Researchno. 6_Supplement (2024): 2271-2271
Jens Luebeck, Edwin Huang,Forrest Kim,Ted Liefeld,Bhargavi Dameracharla, Rohil Ahuja,Daniel Schreyer, Gino Prasad, Michał Adamaszek, Rishaan Kenkre, Tushar Agashe, Devika Torvi,
biorxiv(2024)
Kaiyuan Zhu,Matthew G Jones, Jens Luebeck, Xinxin Bu,Hyerim Yi,King L Hung,Ivy Tsz-Lo Wong, Shu Zhang,Paul S Mischel,Howard Y Chang,Vineet Bafna
bioRxiv : the preprint server for biologypp.454-457, (2024)
Albert S. Agustinus,Duaa Al-Rawi,Bhargavi Dameracharla,Ramya Raviram, Bailey S. Jones,Stephanie Stransky,Lorenzo Scipioni,Jens Luebeck,Melody Di Bona, Danguole Norkunaite,Robert M. Myers,Mercedes Duran,
Cancer Researchno. 6_Supplement (2024): 4293-4293
Jun Tang,Natasha E. Weiser, Guiping Wang,Sudhir Chowdhry,Ellis J. Curtis,Yanding Zhao,Ivy Tsz-Lo Wong,Georgi K. Marinov,Rui Li,Philip Hanoian, Edison Tse,Ryan Hansen,
crossref(2024)
Chris Bailey,Oriol Pich,Kerstin Thol,Jens Luebeck, Georgia Stavrou,Thomas B. Watkins,Natasha E. Weiser,Wei-Ting Lu, Jeanette Kittel,Robert Bentham, Natasha Sharma, Roberto Salgado,
Cancer Researchno. 6_Supplement (2024): 3887-3887
Cancer Researchno. 7_Supplement (2023): 3130-3130
bioRxiv (Cold Spring Harbor Laboratory)no. 7 (2023)
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