Timothy J. Tschaplinski

Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, United States

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Papers119 papers

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Host plant genetic control of associated fungal and insect species in a Populus hybrid cross

Sandra J. Simon,Timothy J. Tschaplinski, Jared LeBoldus, Ken Keefover‐Ring,Muhammad Azeem,Jin‐Gui Chen,David Macaya‐Sanz, William L. MacDonald,Wellington Muchero,Stephen P. DiFazio

Ecology and evolution, no. 11 (2020): 5119-5134

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Transcriptional and Post-transcriptional Regulation of Lignin Biosynthesis Pathway Genes in Populus

Jin Zhang,Gerald A. Tuskan,Timothy J. Tschaplinski,Wellington Muchero,Jin-Gui Chen

Frontiers in Plant Science, (2020): 652

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Isolation, Characterization, and Pathogenicity of Two Pseudomonas syringae Pathovars from Populus trichocarpa Seeds

Patricia Mb Saint-Vincent, Mary Ridout,Nancy L Engle, Travis J Lawrence, Meredith L Yeary,Timothy J Tschaplinski,George Newcombe,Dale A Pelletier

Microorganisms, no. 8 (2020): 1137

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Understanding the Structural and Dynamic Changes that Relieve Inhibition of Impdh upon Horizontal Transfer of a Pathway for Coumarate Catabolism in E. coli

Madhulika Gupta,Dan M. Close, Connor J. Cooper, Xingyou Wang, Payal Chirania, John R. Ossyra,Richard J. Giannone,Nancy L. Engle,Timothy J. Tschaplinski,Jeremy C. Smith,Lizbeth Hedstrom,Jerry M. Parks

Biophysical Journal, no. 3 (2020)

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Plant Hosts Modify Belowground Microbial Community Response to Extreme Drought

Allison M Veach, Huaihai Chen,Zamin K Yang, Audrey D Labbe,Nancy L Engle,Timothy J Tschaplinski,Christopher W Schadt, Melissa A Cregger

mSystems, no. 3 (2020)

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Identification of functional single nucleotide polymorphism of Populus trichocarpa PtrEPSP-TF and determination of its transcriptional effect

Meng Xie,Jin Zhang,Vasanth R Singan, Melissa J McGranahan, Peter R LaFayette,Sara S Jawdy,Nancy Engle, Crissa Doeppke,Timothy J Tschaplinski,Mark F Davis,Erika Lindquist,Kerrie Barry

Plant direct, no. 1 (2020)

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Horizontal transfer of a pathway for coumarate catabolism unexpectedly inhibits purine nucleotide biosynthesis

Dan M. Close, Connor J. Cooper, Xingyou Wang, Payal Chirania, Madhulika Gupta, John R. Ossyra,Richard J. Giannone,Nancy Engle,Timothy J. Tschaplinski,Jeremy C. Smith,Lizbeth Hedstrom,Jerry M. Parks

Molecular Microbiology, (2019)

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Correction to: Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave

Hengfu Yin,Hao-Bo Guo,David J. Weston,Anne M. Borland,Anne M. Borland,Priya Ranjan,Paul E. Abraham,Sara S. Jawdy,James Wachira,Gerald A. Tuskan,Timothy J. Tschaplinski,Stan D. Wullschleger

BMC Genomics, no. 1 (2019): 1-1

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4-Coumarate 3-hydroxylase in the lignin biosynthesis pathway is a cytosolic ascorbate peroxidase

Jaime Barros,Luis Escamilla-Trevino,Luhua Song,Xiaolan Rao, Juan Carlos Serrani-Yarce, Maite Docampo Palacios,Nancy Engle, Feroza K Choudhury,Timothy J Tschaplinski,Barney J Venables,Ron Mittler,Richard A Dixon

Nature communications, no. 1 (2019): 1994

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Scavenging organic nitrogen and remodeling lipid metabolism are key survival strategies adopted by the endophytic fungi, Serendipita vermifera and Serendipita bescii to alleviate nitrogen and phosphorous starvation in vitro

Prasun Ray,Paul E Abraham, Yingqing Guo,Richard J Giannone,Nancy L Engle,Zamin K Yang,Daniel Jacobson,Robert L Hettich,Timothy J Tschaplinski,Kelly D Craven

Environmental microbiology reports, (2019)

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Multi-trait genome-wide association analysis of Populus trichocarpa identifies key polymorphisms controlling morphological and physiological traits

Hari B Chhetri,David Macaya-Sanz,David Kainer,Ajaya K Biswal,Luke M Evans,Jin-Gui Chen,Cassandra Collins,Kimberly Hunt,Sushree S Mohanty,Todd Rosenstiel,David Ryno,Kim Winkeler

The New phytologist, (2019)

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Rhizosphere microbiomes diverge among Populus trichocarpa plant-host genotypes and chemotypes, but it depends on soil origin

Allison M Veach, Reese Morris, Daniel Z Yip,Zamin K Yang,Nancy L Engle,Melissa A Cregger,Timothy J Tschaplinski,Christopher W Schadt

Microbiome, no. 1 (2019): 1-15

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Data Integration in Poplar: ‘Omics Layers and Integration Strategies

Deborah Weighill,Timothy J. Tschaplinski,Gerald A. Tuskan,Daniel Jacobson

Frontiers in Genetics, (2019)

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Natural variability and antioxidant properties of commercially cultivated switchgrass extractives

Jingming Tao,Kalavathy Rajan,Bonnie Ownley,Kimberly Gwinn, Doris D’Souza, Naima Moustaid-Moussa,Timothy J. Tschaplinski,Nicole Labbé

Industrial Crops and Products, (2019): 111474

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The nature of the progression of drought stress drives differential metabolomic responses in Populus deltoides

Timothy James Tschaplinski,Paul E Abraham,Sara S Jawdy,Lee E Gunter,Madhavi Z Martin,Nancy L Engle,Xiaohan Yang,Gerald A Tuskan

ANNALS OF BOTANY, no. SP4 (2019): 617-626

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Microfluidics and Metabolomics Reveal Symbiotic Bacterial-Fungal Interactions Between Mortierella elongata and Burkholderia Include Metabolite Exchange

Jessie K Uehling, Matthew R Entler, Hannah R Meredith,Larry J Millet,Collin M Timm, Jayde A Aufrecht,Gregory M Bonito,Nancy L Engle,Jessy L Labbé,Mitchel J Doktycz,Scott T Retterer,Joseph W Spatafora

Frontiers in microbiology, (2019): 2163

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Comparative genomics can provide new insights into the evolutionary mechanisms and gene function in CAM plants

Xiaohan Yang,Degao Liu,Timothy J Tschaplinski,Gerald A Tuskan

Journal of experimental botany, (2019)

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Overexpression of a Prefoldin β subunit gene reduces biomass recalcitrance in the bioenergy crop Populus

Jin Zhang, Meng Xie,Mi Li, Jinhua Ding,Yunqiao Pu, Anthony C Bryan,William Rottmann, Kimberly A Winkeler,Cassandra M Collins,Vasanth Singan,Erika A Lindquist,Sara S Jawdy

Plant biotechnology journal, (2019)

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Multi-Phenotype Association Decomposition: Unraveling Complex Gene-Phenotype Relationships

Deborah Weighill, Piet Jones, Carissa Bleker,Priya Ranjan,Manesh Shah,Nan Zhao,Madhavi Martin,Stephen DiFazio,David Macaya-Sanz,Jeremy Schmutz,Avinash Sreedasyam,Timothy Tschaplinski

Frontiers in genetics, (2019): 417

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Combining loss of function of FOLYLPOLYGLUTAMATE SYNTHETASE1 and CAFFEOYL - COA 3 - O - METHYLTRANSFERASE1 for lignin reduction and improved saccharification efficiency in Arabidopsis thaliana

Hongli Xie,Nancy L Engle, Sivasankari Venketachalam,Chang Geun Yoo,Jaime Barros, Mitch Lecoultre, Nikki Howard, Guifen Li, Liang Sun,Avinash C Srivastava,Sivakumar Pattathil,Yunqiao Pu

Biotechnology for Biofuels, no. 1 (2019): 1-20

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