Xiao Tengfei

Laboratory of Bioinformatics and Noncoding RNA, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China.

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Papers24 papers

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CRISPR Screens Identify Essential Cell Growth Mediators in BRAF Inhibitor-resistant Melanoma

Ziyi Li,Binbin Wang, Shengqing Gu,Peng Jiang,Avinash Sahu, Chen-Hao Chen, Tong Han, Sailing Shi, Xiaoqing Wang, Nicole Traugh, Hailing Liu, Yin Liu

Genom. Proteom. Bioinform., no. 1 (2020): 26-40

WOSEIBibtex

ERCC6L2 promotes DNA orientation-specific recombination in mammalian cells

Xiaojing Liu, Tingting Liu, Yafang Shang, Pengfei Dai, Wubing Zhang, Brian J Lee, Min Huang, Dingpeng Yang, Qiu Wu, Liu Daisy Liu, Xiaoqi Zheng,Bo O Zhou

Cell research, pp.1-13, (2020)

WOSBibtex

Integrative analysis of pooled CRISPR genetic screens using MAGeCKFlute

Binbin Wang,Mei Wang,Wubing Zhang,Tengfei Xiao,Chen-Hao Chen, Alexander Wu,Feizhen Wu, Nicole Traugh, Xiaoqing Wang, Ziyi Li, Shenglin Mei, Yingbo Cui

Nature protocols, no. 3 (2019): 756-780

WOSBibtex

Estrogen receptor signaling is reprogrammed during breast tumorigenesis

David Chi, Hari Singhal,Lewyn Li,Tengfei Xiao, Weihan Liu, Matthew Pun,Rinath Jeselsohn, Housheng He,Elgene Lim, Raga Vadhi, Prakash Rao,Henry Long

Proceedings of the National Academy of Sciences of the United States of America, pp.201819155, (2019)

WOSBibtex

CRISPR Screens Identify Essential Cell Growth Mediators in BRAF-inhibitor Resistant Melanoma

Ziyi Li,Binbin Wang, Shengqing Gu,Peng Jiang,Avinash Sahu, Chen-Hao Chen, Tong Han, Sailing Shi, Xiaoqing Wang, Nicole Traugh, Hailing Liu, Yin Liu

Bibtex

CRISPR/Cas9 screens Reveal Dasatinib Targets of Inhibiting T cell Activation and Proliferation

Mei Wang,Qilong Chen, Hailing Liu, Hao Chen,Binbin Wang,Wubing Zhang, Ailu Mading, Wenjing Li, Shuangqi Li, Hang Liu, ZhongKai Gu, Shuxia Liu

bioRxiv, pp.448662-19, (2018)

Bibtex

Improved design and analysis of CRISPR knockout screens

Chen-Hao Chen,Tengfei Xiao,Han Xu,Peng Jiang,Clifford A Meyer, Wei Li,Myles Brown,X Shirley Liu

BIOINFORMATICS, no. 23 (2018): 4095-4101

Cited by13WOSEIBibtex

Estrogen-regulated feedback loop limits the efficacy of estrogen receptor-targeted breast cancer therapy

Tengfei Xiao, Wei Li, Xiaoqing Wang,Han Xu, Jixin Yang, Qiu Wu,Ying Huang,Joseph Geradts,Peng Jiang, Teng Fei,David Chi,Chongzhi Zang

Proceedings of the National Academy of Sciences of the United States of America, (2018)

Cited by2WOSBibtex

Reducing False Positives in CRISPR/Cas9 Screens from Copy Number Variations

Alexander C. Wu,Tengfei Xiao, Teng Fei, Shirley X. Liu, Wei Li

bioRxiv, pp.247031-20, (2018)

Cited by3Bibtex

Integrative analysis and refined design of CRISPR knockout screens

Chen-Hao Chen, Wei Li,Tengfei Xiao,Han Xu,Peng Jiang,Clifford A. Meyer,Myles Brown,Xiaole Shirley Liu

bioRxiv, pp.106534-34, (2017)

Cited by1Bibtex

Merkel cell polyomavirus recruits MYCL to the EP400 complex to promote oncogenesis

Jingwei Cheng, Donglim Esther Park,Christian Berrios,Elizabeth A White, Reety Arora,Rosa Yoon, Timothy Branigan,Tengfei Xiao,Thomas Westerling,Alexander Federation,Rhamy Zeid, Benjamin Strober

PLoS pathogens, no. 10 (2017)

Cited by6WOSBibtex

TDP-43 regulates cancer-associated microRNAs

Xiaowei Chen,Zhen Fan, Warren McGee,Mengmeng Chen,Ruirui Kong,Pushuai Wen,Tengfei Xiao,Xiaomin Chen,Jianghong Liu,Li Zhu,Runsheng Chen,Jane Y Wu

Protein & cell, (2017)

Cited by4WOSBibtex

Inactivation of the PBRM1 tumor suppressor gene amplifies the HIF-response in VHL−/− clear cell renal carcinoma

Wenhua Gao,Wei Li,Tengfei Xiao,Xiaole Shirley Liu,William G. Kaelin, Jr.

Proceedings of the National Academy of Sciences of the United States of America, no. 5 (2017): 1027-1032

Cited by58WOSBibtex

Abstract PR06: CRISPR screens identified drivers of endocrine resistance and synthetic lethal vulnerabilities in breast cancer

Tengfei Xiao, Wei Li, Xiaoqing Wang,Han Xu, Qiu Wu,Peng Jiang, Jixin Yang, Teng Fei,Chongzhi Zang, Qi Liao, Jonathan Rennhack,Eran R. Andrechek

Molecular Cancer Therapeutics, (2017)

Bibtex

Genome-scale deletion screening of human long non-coding RNAs using a paired-guide RNA CRISPR-Cas9 library

Shiyou Zhu,Wei Li, Jingze Liu,Chen-Hao Chen, Qi Liao,Ping Xu,Han Xu,Tengfei Xiao, Zhongzheng Cao,Jingyu Peng,Pengfei Yuan,Myles Brown

Nature biotechnology, no. 12 (2016): 1279-1286

Cited by217WOSBibtex

Abstract B24: High-dimensional genomic data integration and bias correction using MANCIE

Chongzhi Zang,Tao Wang, Ke Deng,Bo Li, Shengen Hu, Qian Qin,Tengfei Xiao,Shihua Zhang,Clifford A. Meyer,Housheng Hansen He,Myles Brown,Jun S. Liu

Cancer Research, (2016)

Bibtex

Modeling cis-regulation with a compendium of genome-wide histone H3K27ac profiles

Su Wang,Chongzhi Zang,Tengfei Xiao, Jingyu Fan, Shenglin Mei, Qian Qin, Qiu Wu, Xujuan Li, Kexin Xu,Housheng Hansen He,Myles Brown,Clifford A Meyer

Genome research, no. 10 (2016): 1417-1429

Cited by36WOSBibtex

Transcriptional profiling analysis and functional prediction of long noncoding RNAs in cancer

Jiao Yuan, Haiyan Yue, Meiying Zhang,Jianjun Luo,Lihui Liu,Wei Wu,Tengfei Xiao,Xiaowei Chen,Xiaomin Chen, Dongdong Zhang,Rui Xing, Xin Tong

Oncotarget, (2016)

Cited by30WOSBibtex

High-dimensional genomic data bias correction and data integration using MANCIE

Chongzhi Zang, Tao Wang,Ke Deng,Bo Li, Sheng’en Hu, Qian Qin,Tengfei Xiao,Shihua Zhang,Clifford A. Meyer,Housheng Hansen He,Myles Brown,Jun S. Liu

Nature Communications, (2016)

Cited by24WOSNATUREBibtex

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