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Shawn M. Gomez

Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA|Department of Pharmacology, University of North Carolina School of Medicine, Chapel Hill, North Carolina, USA|Joint Department of Biomedical Engineering, University of North Carolina School of Medicine, Chapel Hill, North Carolina, USA

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The Dark Kinase Knowledgebase: an online compendium of knowledge and experimental results of understudied kinases

Matthew E Berginski, Nienke Moret, Changchang Liu, Dennis Goldfarb,Peter K Sorger,Shawn M Gomez

Nucleic acids research, (2020)

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EMBER: Multi-label prediction of kinase-substrate phosphorylation events through deep learning

Kathryn E. Kirchoff,Shawn M. Gomez

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Recombination drives the evolution of mutational robustness

Sonia Singhal,Shawn M. Gomez,Christina L. Burch

Current Opinion in Systems Biology, (2019): 142-149

Cited by1WOSBibtex

Erratum: Unexplored therapeutic opportunities in the human genome

Tudor I. Oprea,Cristian G. Bologa, Søren Brunak, Allen Campbell, Gregory N. Gan,Anna Gaulton,Shawn M. Gomez,Rajarshi Guha,Anne Hersey, Jayme Holmes,Ajit Jadhav,Lars Juhl Jensen

Nature Reviews Drug Discovery, no. 5 (2018): 377-377

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Spatiotemporal organization of exocytosis emerges during neuronal shape change

Fabio L Urbina,Shawn M Gomez,Stephanie L Gupton

The Journal of cell biology, (2018)

Cited by2WOSBibtex

Coral: Clear and Customizable Visualization of Human Kinome Data

Kathleen S Metz, Erika M Deoudes,Matthew E Berginski, Ivan Jimenez-Ruiz,Bulent Arman Aksoy,Jeff Hammerbacher,Shawn M Gomez,Douglas H Phanstiel

Cell Systems, no. 3 (2018): 347-350.e1

Cited by1WOSBibtex

Proteomic analysis defines kinase taxonomies specific for subtypes of breast cancer

Kyla A L Collins, Timothy J Stuhlmiller,Jon S Zawistowski, Michael P East,Trang T Pham, Claire R Hall, Daniel R Goulet, Samantha M Bevill,Steven P Angus, Sara H Velarde,Noah Sciaky,Tudor I Oprea

Oncotarget, no. 21 (2018): 15480-15497

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Unexplored therapeutic opportunities in the human genome

Tudor I Oprea,Cristian G Bologa, Søren Brunak, Allen Campbell, Gregory N Gan,Anna Gaulton,Shawn M Gomez,Rajarshi Guha,Anne Hersey, Jayme Holmes,Ajit Jadhav,Lars Juhl Jensen

Nature reviews. Drug discovery, (2018)

Cited by20WOSBibtex

Erratum for Perkowski et al., "The EXIT Strategy: an Approach for Identifying Bacterial Proteins Exported during Host Infection"

E F Perkowski,K E Zulauf, D Weerakoon,J D Hayden,T R Ioerger, D Oreper,S M Gomez,J C Sacchettini,M Braunstein

mBio, no. 3 (2017)

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The EXIT Strategy: an Approach for Identifying Bacterial Proteins Exported during Host Infection

E F Perkowski,K E Zulauf, D Weerakoon,J D Hayden,T R Ioerger, D Oreper,S M Gomez,J C Sacchettini,M Braunstein

mBio, no. 2 (2017)

Cited by4WOSBibtex

Dynamic Spatiotemporal Organization of Exocytosis During Cellular Shape Change

Fabio Urbina,Shawn M. Gomez,Stephanie Gupton

bioRxiv, pp.185249-49, (2017)

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MAP3K4 Controls the Chromatin Modifier HDAC6 during Trophoblast Stem Cell Epithelial-to-Mesenchymal Transition

Robert J Mobley, Deepthi Raghu, Lauren D Duke, Kayley Abell-Hart,Jon S Zawistowski, Kyla Lutz,Shawn M Gomez,Sujoy Roy,Ramin Homayouni,Gary L Johnson,Amy N Abell

Cell Reports, no. 10 (2017): 2387-2400

Cited by7WOSBibtex

First stereoselective acylation of a primary diol possessing a prochiral quaternary center mediated by lipase TL from Pseudomonas stutzeri

A Pizzilli, R Zoppi,Pilar Hoyos,Shawn M Gomez,Francesco G Gatti,Maria J Hernaiz,Andres R Alcantara

Tetrahedron, (2015)

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Visinets: A Web-Based Pathway Modeling and Dynamic Visualization Tool

Jozef Spychala, Pawel Spychala,Shawn M Gomez,Gabriel E Weinreb

PloS one, no. 5 (2015)

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Transient activation (tyrosine or serine/threonine phosphorylation) of EGFR and MAPK pathway components shown in Visinets using Plot function

Jozef Spychala, Pawel Spychala,Shawn M Gomez,Gabriel E Weinreb

(2015)

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Correction: Corrigendum: Dissecting motility signaling through activation of specific Src-effector complexes

Andrei V Karginov,Denis Tsygankov,Matthew Berginski,Pei-Hsuan Chu, Evan D Trudeau,Jason J Yi,Shawn Gomez,Timothy C Elston,Klaus M Hahn

Nature Chemical Biology, no. 8 (2014): 692-692

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LKB1 loss in melanoma disrupts directional migration toward extracellular matrix cues

James E Bear,Norman E Sharpless,Shawn M Gomez,Ian J Davis,Jeremy M Simon,Matthew E Berginski, Wen Liu,Evan S Dubose,Tao Bo,Samantha J King,Sreeja B Asokan,Keefe T Chan

Journal of Cell Biology, (2014)

Cited by2Bibtex

Corrigendum: Dissecting motility signaling through activation of specific Src-effector complexes

Andrei V Karginov,Denis Tsygankov,Matthew E Berginski,Peihsuan Chu,Evan D Trudeau, Jason J Yi,Shawn M Gomez,Timothy C Elston,Klaus M Hahn

Nature Chemical Biology, (2014)

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New Tools for Activation of Src Family Isoforms In Vivo Demonstrate Specific Roles for Each Isoform in Cell Motility

Peihsuan Chu,Andrei V Karginov,Denis Tsygankov,Matthew E Berginski,Shawn M Gomez,Timothy C Elston,Klaus M Hahn

Biophysical Journal, (2013)

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Engineered Manipulation of Signaling Networks: Control of Kinase Activation and Interactions Dissects Parallel Src Pathways

Andrei V Karginov, Denis Tsygangov,Matthew E Berginski,Evan D Trudeau,Peihsuan Chu,Jason J Yi,Shawn M Gomez,Timothy C Elston,Klaus M Hahn

Biophysical Journal, (2013)

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