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Sam Griffiths-Jones

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Quo vadis microRNAs

Bastian Fromm,Andreas Keller, Xiaozeng Yang, Marc R Friedlander,Kevin J Peterson,Sam Griffiths-Jones

Trends in genetics : TIG, no. 7 (2020): 461-463

WOSBibtex

Dynamical gene regulatory networks are tuned by transcriptional autoregulation with microRNA feedback

Thomas G Minchington,Sam Griffiths-Jones,Nancy Papalopulu

Scientific reports, no. 1 (2020): 12960-35

WOSBibtex

Rfam 14: expanded coverage of metagenomic, viral and microRNA families

Ioanna Kalvari,Eric P Nawrocki, Nancy Ontiveros-Palacios,Joanna Argasinska, Kevin Lamkiewicz,Manja Marz,Sam Griffiths-Jones,Claire Toffano-Nioche,Daniel Gautheret, Zasha Weinberg,Elena Rivas,Sean R Eddy

Nucleic acids research, (2020)

WOSBibtex

The Transcription Factor-microRNA Regulatory Network during hESC-chondrogenesis

Rosie Griffiths,Steven Woods, Aixin Cheng, Ping Wang,Sam Griffiths-Jones,Matthew Ronshaugen,Susan J Kimber

Scientific reports, no. 1 (2020): 4744

WOSBibtex

Single cell visualisation of mir-9a and Senseless co-expression during Drosophila melanogaster embryonic and larval peripheral nervous system development

Lorenzo Gallicchio,Sam Griffiths-Jones,Matthew Ronshaugen

Bibtex

Large-scale profiling of noncoding RNA function in yeast

Steven Parker,Marcin G Fraczek,Jian Wu, Sara Shamsah, Alkisti Manousaki, Kobchai Dungrattanalert,Rogerio Alves de Almeida, Edith Invernizzi, Tim Burgis, Walid Omara,Sam Griffiths-Jones,Daniela Delneri

PLoS genetics, no. 3 (2018)

WOSBibtex

miRBase: from microRNA sequences to function

Ana Kozomara, Maria Birgaoanu,Sam Griffiths-Jones

Nucleic acids research, (2018)

Cited by5WOSEIBibtex

RNAcentral: a comprehensive database of non coding RNA sequences

Anton I. Petrov, Simon J E Kay, Ioanna Kalvari,Kevin L. Howe,Kristian A. Gray,Elspeth A. Bruford, Paul J. Kersey,Guy Cochrane,Robert D. Finn,Alex Bateman, Ana Kozomara,Sam Griffiths-Jones

Cited by124Bibtex

Abundant expression of somatic transposon-derived piRNAs throughout Tribolium castaneum embryogenesis

Maria Ninova,Sam Griffiths-Jones,Matthew Ronshaugen

Genome Biology, no. 1 (2017): 184-184

Cited by3WOSBibtex

Small RNAs: Big Impact on Plant Development

Marco D'Ario,Sam Griffiths-Jones,Minsung Kim

Trends in plant science, (2017)

Cited by15WOSBibtex

Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum

Daniel J. Leite,Maria Ninova,Maarten Hilbrant,Saad Arif,Sam Griffiths-Jones,Matthew Ronshaugen,Alistair P. McGregor

Genome Biology and Evolution, no. 7 (2016): 2133-2144

Bibtex

MicroRNA evolution, expression and function during short germband development in Tribolium castaneum

Maria Ninova,Matthew Ronshaugen,Sam Griffiths-Jones

Genome research, (2015)

Cited by17WOSBibtex

Tribolium castaneum as a model for microRNA evolution, expression and function during short germband development

Maria Ninova,Matthew Ronshaugen,Sam Griffithsjones

pp.1-44 (2015)

Cited by2Bibtex

NOVEL INTRONIC NON-CODING RNAS CONTRIBUTE TO MAINTENANCE OF PHENOTYPE IN SACCHAROMYCES CEREVISIAE

Katarzyna B. Hooks,Samina Naseeb,Sam Griffiths-Jones,Daniela Delneri

bioRxiv, pp.033076-49, (2015)

Bibtex

Conservation and losses of avian non-coding RNA loci

Paul P Gardner,Mario Fasold,Sarah Burge,Maria Ninova,Jana Hertel,Stephanie Kehr,Tammy E Steeves,Sam Griffithsjones,Peter F Stadler

(2014)

Cited by2Bibtex

miRBase: annotating high confidence microRNAs using deep sequencing data

Ana Kozomara,Sam Griffiths-Jones

Nucleic Acids Research, no. Database issue (2014): D68-73

Cited by5057WOSEIBibtex

Prototypical Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

Ariel D Chipman, David E K Ferrier,Carlo Brena, Jiaxin Qu, D Hughes, Re Schroder, M Torresoliva, Nadia Znassi, Hong Jiang, Francisca C Almeida, Claudio R Alonso,Zivkos Apostolou

(2014)

Cited by2Bibtex

Detection of microRNAs in color space

Antonio Marco,Sam Griffiths-Jones

Bioinformatics, no. 3 (2012): 318-323

Cited by20WOSEIBibtex

Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain

Preethi H Gunaratne,Ya-Chi Lin,Ashley L Benham,Jenny Drnevich,Cristian Coarfa,Jayantha B Tennakoon,Chad J Creighton,Jong H Kim,Aleksandar Milosavljevic,Michael Watson,Sam Griffiths-Jones,David F Clayton

BMC Genomics, no. 1 (2011): 277-277

Cited by46WOSBibtex

miRBase: integrating microRNA annotation and deep-sequencing data

Ana Kozomara,Sam Griffiths-Jones

Nucleic Acids Research, no. Database issue (2011): D152-7

Cited by5031WOSEIBibtex

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