Pingzhao Hu

The Centre for Applied Genomics, The Hospital for Sick Children, 15-706 TMDT, 101 College Street, Toronto, ON, M5G 1L7, Canada

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Papers98 papers

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Epigenetics of Sepsis

Alexandra Binnie, Jennifer L Y Tsang,Pingzhao Hu, Gabriela Carrasqueiro,Pedro Castelo-Branco,Claudia C Dos Santos

Critical care medicine, (2020)

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A machine learning-based clinical tool for diagnosing myopathy using multi-cohort microarray expression profiles

Andrew Tran, Chris J Walsh,Jane Batt,Claudia C Dos Santos,Pingzhao Hu

Journal of translational medicine, no. 1 (2020): 454

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Discovery of inflammatory bowel disease-associated miRNAs using a novel bipartite clustering approach

Md Altaf-Ul-Amin, Mohammad Bozlul Karim,Pingzhao Hu,Naoaki Ono,Shigehiko Kanaya

BMC Medical Genomics, no. suppl (2020): 1-10

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Integrative Data Augmentation with U-Net Segmentation Masks Improves Detection of Lymph Node Metastases in Breast Cancer Patients

Yong Won Jin, Shuo Jia, Ahmed Bilal Ashraf,Pingzhao Hu

Cancers, no. 10 (2020): 2934

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Dynamics of the cell-free DNA methylome of metastatic castration resistant prostate cancer during androgen-targeting treatment

Madonna R. Peter,Misha Bilenky,Ruth Isserlin,Gary D. Bader, Shu Yi Shen,Daniel D. De Carvalho,Aaron R. Hansen,Pingzhao Hu,Neil E. Fleshner,Anthony M. Joshua,Martin Hirst,Bharati Bapat

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An integrative deep learning framework for classifying molecular subtypes of breast cancer

Md Mohaiminul Islam, Shujun Huang, Rasif Ajwad, Chen Chi,Yang Wang,Pingzhao Hu

Computational and structural biotechnology journal, (2020): 2185-2199

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Dynamics of the cell-free DNA methylome of metastatic prostate cancer during androgen-targeting treatment

Madonna R Peter, Misha Bilenky,Ruth Isserlin,Gary D Bader, Shu Yi Shen,Daniel D De Carvalho,Aaron R Hansen,Pingzhao Hu,Neil E Fleshner,Anthony M Joshua,Martin Hirst,Bharati Bapat

Epigenomics, no. 15 (2020): 1317-1332

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Mesenchymal stromal/stem cells modulate response to experimental sepsis-induced lung injury via regulation of miR-27a-5p in recipient mice

Nadim Younes, Louis Zhou,Hajera Amatullah,Shirley H J Mei, Raquel Herrero, Jose Angel Lorente,Duncan J Stewart, Philip Marsden,W Conrad W Liles,Pingzhao Hu,Claudia C Dos Santos

Thorax, no. 7 (2020): 556-567

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Development of a machine learning-based multimode diagnosis system for lung cancer

Shuyin Duan, Huimin Cao,Hong Liu, Lijun Miao,Jing Wang, Xiaolei Zhou,Wei Wang,Pingzhao Hu, Lingbo Qu,Yongjun Wu

AGING-US, no. 10 (2020): 9840-9854

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Tumor-Infiltrating CD8 T Cells Predict Clinical Breast Cancer Outcomes in Young Women

Yong Won Jin,Pingzhao Hu

Cancers, no. 5 (2020): 1076

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Deep graph embedding for prioritizing synergistic anticancer drug combinations

Peiran Jiang, Shujun Huang, Zhenyuan Fu, Zexuan Sun, Ted M Lakowski,Pingzhao Hu

Computational and structural biotechnology journal, (2020): 427-438

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Mesenchymal Stem/Stromal Cells Increase Cardiac MIR-187-3P Expression in Polymicrobial Animal Model of Sepsis

Amin M Ektesabi, Keisuke Mori,James Tsoporis, Chirag Vaswani, Sahil Gupta, Chris Walsh, Amir K Varkouhi,Shirley H J Mei,Duncan J Stewart,W Conrad Liles,John Marshall,Pingzhao Hu

Shock (Augusta, Ga.), (2020)

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DTF: Deep Tensor Factorization for Predicting Anticancer Drug Synergy

Sun Zexuan, Huang Shujun, Jiang Peiran,Hu Pingzhao

Bioinform., no. 16 (2019): 4483-4489

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MiR-490-3p and MiR-744-5p Are Increased in ICU Acquired Weakness (ICUAW) and Regulate Myoblast Differentiation and Proliferation

J. Batt, C. Escudero King, C. J. Walsh, P. Plant, S. Ahmed, J. Correa,S. Mathur,M. S. Herridge,P. Hu,C. C. Dos Santos

AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, (2019)

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Epigenetic Profiling in Severe Sepsis: A Pilot Study of DNA Methylation Profiles in Critical Illness

Alexandra Binnie,Christopher J Walsh,Pingzhao Hu,Dhruva J Dwivedi,Alison Fox-Robichaud, Patricia C Liaw, Jennifer L Y Tsang,Jane Batt, Gabriela Carrasqueiro, Sahil Gupta,John C Marshall,Pedro Castelo-Branco

Critical care medicine, no. 2 (2019): 142-150

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Genome-wide analysis identifies rare copy number variations associated with inflammatory bowel disease

Svetlana Frenkel,Charles N. Bernstein,Michael Sargent, Qin Kuang, Wenxin Jiang,John Wei,Bhooma Thiruvahindrapuram, Elizabeth Spriggs,Stephen W. Scherer,Pingzhao Hu

PLOS ONE, no. 6 (2019)

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Automated Counting of Cancer Cells by Ensembling Deep Features

Qian Liu, Anna Junker, Kazuhiro Murakami,Pingzhao Hu

Cells, no. 9 (2019): 1019

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Genome-wide copy number variant data for inflammatory bowel disease in a caucasian population

Svetlana Frenkel,Charles N Bernstein, Yong Won Jin,Michael Sargent, Qin Kuang, Wenxin Jiang,John Wei,Bhooma Thiruvahindrapuram,Stephen W Scherer,Pingzhao Hu

Data in Brief, (2019): 104203

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Predicting Drug-Drug Interactions Using Deep Neural Network

Xinyu Hou, Jiaying You,Pingzhao Hu

Proceedings of the 2019 11th International Conference on Machine Learning and Computing, pp.168-172, (2019)

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Copy number variation-based gene set analysis reveals cytokine signalling pathways associated with psychiatric comorbidity in patients with inflammatory bowel disease

Svetlana Frenkel,Charles N Bernstein,Michael Sargent, Wenxin Jiang, Qin Kuang,Wei Xu,Pingzhao Hu

Genomics, no. 1 (2019): 683-693

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