Narayanan Eswar

Departments of Biopharmaceutical Sciences and Pharmaceutical Chemistry and California Institute for Quantitative Biomedical Research, University of California, San Francisco, San Francisco, CA 94143 USA

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Papers29 papers

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A kernel for the Tropical Disease Initiative

Leticia Ortí,Rodrigo J Carbajo,Ursula Pieper,Narayanan Eswar,Stephen M Maurer,Arti K Rai,Ginger Taylor,Matthew H Todd,Antonio Pineda-Lucena,Andrej Sali,Marc A Marti-Renom

Nature biotechnology, no. 4 (2009): 320-321

Cited by8WOSNATUREBibtex

A kernel for open source drug discovery in tropical diseases

Leticia Ortí,Rodrigo J Carbajo,Ursula Pieper,Narayanan Eswar,Stephen M Maurer,Arti K Rai,Ginger Taylor,Matthew H Todd,Antonio Pineda-Lucena,Andrej Sali,Marc A Marti-Renom

PLoS neglected tropical diseases, no. 4 (2009): e418-e418

Cited by35WOSBibtex

Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamilies

Ursula Pieper,Ranyee Chiang,Jennifer J Seffernick,Shoshana D Brown,Margaret E Glasner,Libusha Kelly,Narayanan Eswar,J Michael Sauder,Jeffrey B Bonanno,Subramanyam Swaminathan,Stephen K Burley, Xiaojing Zheng

Journal of structural and functional genomics, no. 2 (2009): 107-125

Cited by31WOSBibtex

A survey of integral α-helical membrane proteins

Libusha Kelly,Ursula Pieper,Narayanan Eswar,Franklin A. Hays,Min Li,Zygy Roe-Zurz,Deanna L. Kroetz,Kathleen M. Giacomini,Robert M. Stroud,Andrej Sali

Journal of Structural and Functional Genomics, no. 4 (2009): 269-280

Cited by14Bibtex

Structure of the mammalian 80S ribosome at 87 angstrom resolution

Preethi Chandramouli,Maya Topf,Jeanfrancois Menetret,Narayanan Eswar,Jamie J Cannone,Robin R Gutell,Andrej Sali,Christopher W Akey

(2008)

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How well can the accuracy of comparative protein structure models be predicted

David Eramian,Narayanan Eswar,Min-Yi Shen,Andrej Sali

Protein science : a publication of the Protein Society, no. 11 (2008): 1881-1893

Cited by104WOSBibtex

Structure of the Mammalian 80S Ribosome at 8.7 Å Resolution

Preethi Chandramouli,Maya Topf,Jean-François Ménétret,Narayanan Eswar,Jamie J. Cannone,Robin R. Gutell,Andrej Sali,Christopher W. Akey

Structure, no. 4 (2008): 535-548

Cited by163EIBibtex

Prediction of enzyme function by combining sequence similarity and protein interactions

Jordi Espadaler,Narayanan Eswar,Enrique Querol,Francesc X Avilés,Andrej Sali,Marc A Marti-Renom,Baldomero Oliva

BMC Bioinformatics, no. 1 (2008): 249-249

Cited by92WOSEIBibtex

Structure Determination of Macromolecular Complexes by Experiment and Computation

Frank Alber,Narayanan Eswar,Andrej Sali

(2008)

Cited by12Bibtex

DBAli tools: mining the protein structure space

Marc A. Martí-Renom,Ursula Pieper, Mallur S. Madhusudhan,Andrea Rossi,Narayanan Eswar,Fred P. Davis,Fátima Al-Shahrour,Joaquín Dopazo,Andrej Sali

Nucleic Acids Research, no. Web-Server-Issue (2007): 393-397

Cited by29EIWOSBibtex

Simple fold composition and modular architecture of the nuclear pore complex

Damien Devos,Svetlana Dokudovskaya,Rosemary Williams,Frank Alber,Narayanan Eswar,Brian T. Chait,Michael P. Rout,Andrej Sali,Peter Walter

Proceedings of the National Academy of Sciences of the United States of America, no. 7 (2006): 2172-2177

Cited by291WOSBibtex

MODBASE: a database of annotated comparative protein structure models and associated resources

Ursula Pieper,Narayanan Eswar,Fred P. Davis,Hannes Braberg,Mallur S. Madhusudhan,Andrea Rossi,M Marti-Renom,Rachel Karchin,Ben M. Webb,David Eramian,Min-yi Shen,Libusha Kelly

Nucleic Acids Research, no. Database-I (2006): 291-295

Cited by253EIBibtex

Detecting remotely related proteins by their interactions and sequence similarity

Jordi Espadaler,Ramón Aragüés,Narayanan Eswar,Marc A Marti-Renom,Enrique Querol,Francesc X Avilés,Andrej Sali,Baldomero Oliva

Proceedings of the National Academy of Sciences of the United States of America, no. 20 (2005): 7151-7156

Cited by43WOSBibtex

LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources

Rachel Karchin,Mark Diekhans,Libusha Kelly,Daryl J Thomas,Ursula Pieper,Narayanan Eswar,David Haussler,Andrej Sali

Bioinformatics, no. 12 (2005): 2814-2820

Cited by244WOSEIBibtex

High-Throughput Computational and Experimental Techniques in Structural Genomics

Mark R. Chance,Andras Fiser,Andrej Sali,Ursula Pieper,Narayanan Eswar,Guiping Xu,J. Eduardo Fajardo,Thirumuruhan Radhakannan,Nebojsa Marinkovic

Earth and Planetary Science Letters, no. 10b (2004): 2145-2154

Cited by73WOSBibtex

MODBASE, a database of annotated comparative protein structure models, and associated resources

Ursula Pieper,Narayanan Eswar,Hannes Braberg,Mallur S. Madhusudhan,Fred P. Davis,Ashley C. Stuart,Nebojsa Mirkovic,Andrea Rossi,Marc A. Martí-renom,András Fiser,Ben M. Webb,Daniel M. Greenblatt

Nucleic Acids Research, no. Database-I (2004): 217-222

Cited by204EIBibtex

EVA: evaluation of protein structure prediction servers

Ingrid Y. Y. Koh,Volker A. Eyrich,Marc A. Martí-Renom,Dariusz Przybylski, Mallur S. Madhusudhan,Narayanan Eswar,Osvaldo Graña,Florencio Pazos,Alfonso Valencia,Andrej Sali,Burkhard Rost

Nucleic Acids Research, no. 13 (2003): 3311-3315

Cited by186EIWOSBibtex

Tools for comparative protein structure modeling and analysis

Narayanan Eswar,Bino John,Nebojsa Mirkovic,Andras Fiser,Valentin A Ilyin,Ursula Pieper,Ashley C Stuart,Marc A Marti-Renom, M S Madhusudhan,Bozidar Yerkovich,Andrej Sali

Nucleic Acids Research, no. 13 (2003): 3375-3380

Cited by449WOSEIBibtex

Study of the structural dynamics of the E coli 70S ribosome using real-space refinement

Haixiao Gao,Jayati Sengupta,Mikel Valle,Andrei Korostelev,Narayanan Eswar,Scott M Stagg,Patrick Van Roey,Rajendra K Agrawal,Stephen C Harvey,Andrej Sali,Michael S Chapman,Joachim Frank

Cell, no. 6 (2003): 789-801

Cited by301WOSEIBibtex

Modeling Protein Structure from its Sequence

Marc A Martirenom,M S Madhusudhan,Narayanan Eswar,Ursula Pieper,Minyi Shen,Andrej Sali,Andras Fiser,Nebojsa Mirkovic,Bino John,Ashley C Stuart

(2003)

Cited by12Bibtex

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