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During this time, Dr. Pop participated in a number of bacterial and eukaryotic genome projects including important human pathogens such as Bacillus anthracis and Entamoeba hystolitica. Since joining the University of Maryland, Dr. Pop has continued to develop novel approaches for genome assembly and analysis, and has developed extensive expertise in the analysis of metagenomic data. His lab has developed a number of widely used open-source software tools, such as the assembly suite AMOS, the NGS aligner Bowtie, the taxonomic classifier Metaphyler, and the metagenomic assembly package MetAMOS. Most recently he co-led the data analysis working group for the Human Microbiome Project and led the sub-group responsible for the assembly of the data generated in this project. In the context of pathogen detection and identification, Dr. Pop was a key member of the team that analyzed the Bacillus anthracis strains used in the biowarfare attack from 2001, helping to develop the diagnostic test that ultimately helped to identify the source of the attack strain.
研究兴趣
论文共 299 篇作者统计合作学者相似作者
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Harihara Subrahmaniam Muralidharan, Jacquelyn S Michaelis,Jay Ghurye,Todd Treangen,Sergey Koren,Marcus Fedarko,Mihai Pop
arxiv(2024)
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Tu Luan, Victoria Cepeda,Bo Liu, Zac Bowen, Ujjwal Ayyangar,Mathieu Almeida,Christopher M. Hill,Sergey Koren,Todd J. Treangen, Adam Porter,Mihai Pop
biorxiv(2024)
biorxiv(2023)
Nucleic acids researchno. 8 (2023): e46-e46
Domenick J Braccia, Glory Minabou Ndjite,Ashley Weiss, Sophia Levy, Stephenie Abeysinghe,Xiaofang Jiang,Mihai Pop,Brantley Hall
bioRxiv : the preprint server for biology (2023)
MATHEMATICSno. 8 (2023): 1816-1816
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Annals of the Rheumatic Diseasesno. Suppl 1 (2023): 1068.1-1069
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