基本信息
views: 32

Bio
My group sits at the intersection of genomics and neuroscience, utilising a number of genomic approaches (RNA-Seq, long-read sequencing, targeted RNA sequencing and single cell sequencing) to investigate gene expression and function in the human brain and in neuropsychiatric disorders. Many regions in our DNA are known to confer risk to disease, including neuropsychiatric disorders, but the genes responsible and how they confer risk are often unknown.
We are interested in identifying these genes (both protein coding and noncoding) and how their expression can change to cause disease risk. We utilise both post-mortem human brain and neurons derived from induced pluripotent stem cells (iPSCs) to help answer these questions.
A second research interest of my group is to develop and utilise novel sequencing methods. We have worked in the past to help develop targeted RNA sequencing to allow highly sensitive detection and quantification of genes of interest. More recently we have focused on utilising Nanopore sequencing, a technology that can sequence both DNA and native RNA. We are very interested in applying Nanopore sequencing to many research questions and in developing novel applications for this technology.
In addition I have long-standing interests in multiple aspects of RNA biology including noncoding RNAs and RNA post-transcriptional regulation.
We are interested in identifying these genes (both protein coding and noncoding) and how their expression can change to cause disease risk. We utilise both post-mortem human brain and neurons derived from induced pluripotent stem cells (iPSCs) to help answer these questions.
A second research interest of my group is to develop and utilise novel sequencing methods. We have worked in the past to help develop targeted RNA sequencing to allow highly sensitive detection and quantification of genes of interest. More recently we have focused on utilising Nanopore sequencing, a technology that can sequence both DNA and native RNA. We are very interested in applying Nanopore sequencing to many research questions and in developing novel applications for this technology.
In addition I have long-standing interests in multiple aspects of RNA biology including noncoding RNAs and RNA post-transcriptional regulation.
Research Interests
Papers共 231 篇Author StatisticsCo-AuthorSimilar Experts
By YearBy Citation主题筛选期刊级别筛选合作者筛选合作机构筛选
时间
引用量
主题
期刊级别
合作者
合作机构
Avery C Hunker,Morgan E Wirthlin, Gursajan Gill,Nelson J Johansen,Marcus Hooper,Victoria Omstead,Sara Vargas, M Nathaly Lerma,Naz Taskin,Natalie Weed, William D Laird,Yemeserach M Bishaw,Jacqueline L Bendrick,Bryan B Gore,Yoav Ben-Simon,Ximena Opitz-Araya,Refugio A Martinez,Sharon W Way,Bargavi Thyagarajan, Sven Otto,Raymond E A Sanchez, Jason R Alexander, Avalon Amaya,Adam Amster, Joel Arbuckle, Angela Ayala, Pam M Baker, Tyler Barcelli, Stuard Barta,Darren Bertagnolli, Cameron Bielstein,Prajal Bishwakarma,Jessica Bowlus,Gabriella Boyer,Krissy Brouner, Brittny Casian,Tamara Casper,Anish Bhaswanth Chakka,Rushil Chakrabarty,Michael Clark, Kaity Colbert,Scott Daniel, Tim Dawe, Maxwell Departee, Peter DiValentin, Nicholas P Donadio,Nadezhda I Dotson,Deepanjali Dwivedi,Tom Egdorf,Tim Fliss,Amanda Gary,Jeff Goldy,Conor Grasso, Erin L Groce, Kathryn Gudsnuk, Warren Han,Zeb Haradon, Sam Hastings, Olivia Helback, Windy V Ho,Cindy Huang,Tye Johnson, Danielle L Jones,Zoe Juneau, Jaimie Kenney, Madison Leibly, Su Li,Elizabeth Liang, Henry Loeffler, Nicholas A Lusk, Zachary Madigan, Jessica Malloy,Jocelin Malone,Rachel McCue,Jose Melchor,John K Mich, Skyler Moosman,Elyse Morin, Robyn Naidoo,Dakota Newman,Kiet Ngo,Katrina Nguyen, Aaron L Oster,Ben Ouellette, Alana A Oyama, Nick Pena,Trangthanh Pham, Elliot Phillips, Christina Pom,Lydia Potekhina,Shea Ransford,Melissa Reding, Dean F Rette, Cade Reynoldson,Christine Rimorin, Ana Rios Sigler, Dana B Rocha,Kara Ronellenfitch,Augustin Ruiz, Lane Sawyer,Josh Sevigny,Nadiya V Shapovalova, Noah Shepard, Lyudmila Shulga,Sherif Soliman,Brian Staats,Michael J Taormina,Michael Tieu, Yimin Wang, Josh Wilkes, Toren Wood,Thomas Zhou,Ali Williford,Nick Dee,Tyler Mollenkopf,Lydia Ng,Luke Esposito,Brian Kalmbach,Shenqin Yao,Jeanelle Ariza, Forrest Collman,Shoaib Mufti,Kimberly Smith,Jack Waters,Ina Ersing,Marcella Patrick,Hongkui Zeng,Ed S Lein,Yoshiko Kojima, Greg Horwitz,Scott F Owen,Boaz P Levi,Tanya L Daigle,Bosiljka Tasic,Trygve E Bakken,Jonathan T Ting
bioRxiv the preprint server for biology (2025)
Emily Kussick,Nelson Johansen,Naz Taskin, Ananya Chowdhury, Meagan A Quinlan, Alex Fraser, Andrew G Clark, Brooke Wynalda,Refugio Martinez, Erin L Groce,Melissa Reding,Elizabeth Liang, Lyudmila Shulga,Cindy Huang,Tamara Casper,Michael Clark,Windy Ho, Yuan Gao,Cindy T J van Velthoven, Cassandra Sobieski,Rebecca Ferrer,Melissa R Berg, Britni C Curtis,Chris English, Jesse C Day, Michal G Fortuna,Nicholas Donadio,Dakota Newman,Shenqin Yao,Anish Bhaswanth Chakka,Jeff Goldy,Amy Torkelson, Junitta B Guzman,Rushil Chakrabarty, Beagen Nguy,Nathan Guilford, Trangthanh H Pham, Vonn Wright,Kara Ronellenfitch, Robyn Naidoo, Jaimie Kenney,Ali Williford, Charu Ramakrishnan, Antonia Drinnenberg, Kathryn Gudsnuk,Bargavi Thyagarajan,Kimberly A Smith,Nick Dee, Karl Deisseroth,Hongkui Zeng,Zizhen Yao,Bosiljka Tasic,Boaz P Levi,Rebecca Hodge,Trygve E Bakken,Ed S Lein,Jonathan T Ting,Tanya L Daigle
Cell reportspp.115730-115730, (2025)
Kelly Jin,Zizhen Yao,Cindy T. J. van Velthoven,Eitan S. Kaplan,Katie Glattfelder, Samuel T. Barlow,Gabriella Boyer,Daniel Carey,Tamara Casper,Anish Bhaswanth Chakka,Rushil Chakrabarty,Michael Clark,Max Departee, Marie Desierto,Amanda Gary,Jessica Gloe,Jeff Goldy,Nathan Guilford,Junitta Guzman,Daniel Hirschstein,Changkyu Lee,Elizabeth Liang,Trangthanh Pham,Melissa Reding,Kara Ronellenfitch,Augustin Ruiz,Josh Sevigny,Nadiya Shapovalova, Lyudmila Shulga,Josef Sulc,Amy Torkelson,Herman Tung,Boaz Levi,Susan M. Sunkin,Nick Dee,Luke Esposito,Kimberly A. Smith,Bosiljka Tasic,Hongkui Zeng
Cindy T J van Velthoven, Yuan Gao,Michael Kunst,Changkyu Lee,Delissa McMillen,Anish Bhaswanth Chakka,Tamara Casper,Michael Clark,Rushil Chakrabarty,Scott Daniel,Tim Dolbeare,Rebecca Ferrer,Jessica Gloe,Jeff Goldy,Junitta Guzman, Carliana Halterman,Windy Ho, Mike Huang, Katelyn James, Beagan Nguy,Trangthanh Pham,Kara Ronellenfitch,Eric D Thomas,Amy Torkelson,Chelsea M Pagan,Lauren Kruse,Nick Dee,Lydia Ng,Jack Waters,Kimberly A Smith,Bosiljka Tasic,Zizhen Yao,Hongkui Zeng
bioRxiv the preprint server for biology (2024)
Michael Clark, Christina Nguyen, Hung Nguyen,Aidan Tay, Samuel J. Beach,Maciej Maselko,Victor Lopez Del Amo
Communications Biologyno. 1 (2024)
Ricardo De Paoli-Iseppi, Shweta Joshi,Josie Gleeson,Yair David Joseph Prawer,Yupei You, Ria Agarwal, Anran Li, Anthea Hull, Eloise Marie Whitehead, Yoonji Seo, Rhea Kujawa, Raphael Chang,Mriga Dutt,Catriona McLean,Benjamin Leo Parker,Michael Ben Clark
medrxiv(2024)
Yuan Gao,Cindy T J van Velthoven,Changkyu Lee, Emma D Thomas,Darren Bertagnolli,Daniel Carey,Tamara Casper,Anish Bhaswanth Chakka,Rushil Chakrabarty,Michael Clark,Marie J Desierto,Rebecca Ferrer,Jessica Gloe,Jeff Goldy,Nathan Guilford,Junitta Guzman, Carliana R Halterman,Daniel Hirschstein,Windy Ho, Katelyn James,Rachel McCue,Emma Meyerdierks, Beagan Nguy, Nick Pena,Trangthanh Pham,Nadiya V Shapovalova,Josef Sulc,Amy Torkelson, Alex Tran,Herman Tung, Justin Wang,Kara Ronellenfitch,Boaz Levi,Michael J Hawrylycz, Chelsea Pagan,Nick Dee,Kimberly A Smith,Bosiljka Tasic,Zizhen Yao,Hongkui Zeng
bioRxiv the preprint server for biology (2024)
Talitha Bromwich,Thomas White, Alice Bouchez, Isobel Hawkins,Sophus zu Ermgassen,Joseph W. Bull, Harriet Bartlett,Leon Bennun,Elizabeth Biggs,Hollie Booth,Michael Clark, Sami El Geneidy,Graham Prescott,Laura Sonter,Malcolm Starkey,E.J. Milner-Gulland
crossref(2024)
Ching Yin Wan, Jack Davis, Manveer Chauhan,Josie Gleeson,Yair D. J. Prawer,Ricardo De Paoli-Iseppi,Christine A. Wells,Jarny Choi,Michael B. Clark
Nucleic Acids Research (2024)
Yi Yang,David Tilman,Zhenong Jin,Pete Smith,Christopher B Barrett,Yong-Guan Zhu,Jennifer Burney,Paolo D'Odorico,Peter Fantke,Joe Fargione,Jacques C Finlay,Maria Cristina Rulli,Lindsey Sloat,Kees Jan van Groenigen,Paul C West,Lewis Ziska,Anna M Michalak, Clim-Ag Team,David B Lobell,Michael Clark, Jed Colquhoun,Teevrat Garg, Karen A Garrett, Camilla Geels,Rebecca R Hernandez,Mario Herrero, William D Hutchison,Meha Jain,Jacob M Jungers, Beibei Liu,Nathaniel D Mueller,Ariel Ortiz-Bobea, Jacob Schewe, Jie Song, Julie Verheyen,Peter Vitousek,Yoshihide Wada,Longlong Xia, Xin Zhang, Minghao Zhuang
Science (New York, NY)no. 6713 (2024): eadn3747-eadn3747
Load More
Author Statistics
#Papers: 231
#Citation: 27049
H-Index: 56
G-Index: 164
Sociability: 7
Diversity: 4
Activity: 110
Co-Author
Co-Institution
D-Core
- 合作者
- 学生
- 导师
Data Disclaimer
The page data are from open Internet sources, cooperative publishers and automatic analysis results through AI technology. We do not make any commitments and guarantees for the validity, accuracy, correctness, reliability, completeness and timeliness of the page data. If you have any questions, please contact us by email: report@aminer.cn