Joshua Colmer - Earlham Institute | 人才画像

基本信息

Career Trajectory

Bio

My research focuses on utilising machine learning to produce tools for the analysis of high dimension biological or image datasets. At the moment, I am interested in developing methods for the analysis of expression data, specifically detecting interactions that exist between genes and phenotypic data using supervised machine learning algorithms.

Research Interests

Papers共 13 篇Author StatisticsCo-AuthorSimilar Experts

By YearBy Citation主题筛选期刊级别筛选合作者筛选合作机构筛选

Machine Learning Models Reveal Environmental and Genetic Factors Associated with the Plant Circadian Clock

Connor Reynolds,Joshua Colmer,Hannah Rees, Ehsan Khajouei,Rachel L Rusholme-Pilcher,Hiroshi Kudoh,Antony N Dodd,Anthony Hall

biorxiv（2024）

Cited0Views0Bibtex

De Novo Annotation of the Wheat Pan-Genome Reveals Complexity and Diversity Within the Hexaploid Wheat Pan-Transcriptome

biorxiv（2024）

Cited3Views0Bibtex

Circadian Regulation of the Transcriptome in a Complex Polyploid Crop

Hannah Rees,Rachel Rusholme-Pilcher,Paul Bailey,Joshua Colmer,Benjamen White,Connor Reynolds, Sabrina Jaye Ward,Benedict Coombes,Calum A. Graham,Luiza Lane de Barros Dantas,Antony N. Dodd,Anthony Hall

PLOS BIOLOGY（2022）

Cited9Views0WOSBibtex

A ir M easurer : open‐source software to quantify static and dynamic traits derived from multiseason aerial phenotyping to empower genetic mapping studies in rice

Gang Sun,Hengyun Lu,Yan Zhao,Jie Zhou,Robert Jackson,Yongchun Wang,Ling‐xiang Xu,Ahong Wang,Joshua Colmer,Eric Ober,Qiang Zhao,Bin Han,Ji Zhou

New Phytologist（2022）

Cited13Views0Bibtex

AirMeasurer: open-source software to quantify static and dynamic traits derived from multiseason aerial phenotyping to empower genetic mapping studies in rice

Gang Sun,Hengyun Lu,Yan Zhao,Jie Zhou,Robert Jackson,Yongchun Wang,Ling-Xiang Xu,Ahong Wang,Joshua Colmer,Eric Ober,Qiang Zhao,Bin Han,Ji Zhou

The New phytologist（2022）

Cited6Views0WOSBibtex

Circadian and Diel Regulation of Photosynthesis in the Bryophyte Marchantia Polymorpha

David Cuitun-Coronado,Hannah Rees,Joshua Colmer,Anthony Hall,Lui'za L. de Barros Dantas,Antony N. Dodd

PLANT CELL AND ENVIRONMENT (2022)

Cited7Views0WOSBibtex

Methods A IR M EASURER : Open-Source Software to Quantify Static and Dynamic Traits Derived from Multiseason Aerial Phenotyping to Empower Genetic Mapping Studies in Rice

Gang Sun,Hengyun Lu,Yan Zhao,Jie Zhou, R. Jackson, Yongchun Wang, Ling-xiang Xu,Ahong Wang,Joshua Colmer, E. Ober,Qiang Zhao,Bin Han,Ji Zhou

semanticscholar（2022）

Cited0Views0Bibtex

Author Reply to Peer Reviews of Circadian regulation of the transcriptome in a complex polyploid crop

Anthony Hall,Antony N. Dodd,Luíza Lane de Barros Dantas,Calum A. Graham, Sabrina Jaye Ward,Connor Reynolds,Benjamen White,Joshua Colmer,Paul Bailey,Rachel Rusholme-Pilcher,Hannah Rees

crossref（2022）

Cited0Views0Bibtex

Portable LiDAR and 3 D Field Phenotyping in Wheat 1 2 Large-scale Field Phenotyping Using Backpack LiDAR and CropQuant-3 D to Measure Structural 3 Variation in Wheat 4 5

Yulei Zhu,Jie Zhou,Mingxing Wen,Qiang Zhao,Joshua Colmer,Yanfeng Ding, E. Ober,Ji Zhou

semanticscholar（2021）

Cited0Views0Bibtex

Interpreting Machine Learning Models to Investigate Circadian Regulation and Facilitate Exploration of Clock Function

Laura-Jayne Gardiner,Rachel Rusholme-Pilcher,Josh Colmer,Hannah Rees,Juan Manuel Crescente,Anna Paola Carrieri,Susan Duncan,Edward O. Pyzer-Knapp,Ritesh Krishna,Anthony Hall

Proceedings of the National Academy of Sciencesno. 32 (2021)

Cited12Views0WOSBibtex

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