Nils Homer

Department of Human Genetics, University of California, Los Angeles, California, USA

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Papers18 papers

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Correction: U87MG Decoded: The Genomic Sequence of a Cytogenetically Aberrant Human Cancer Cell Line

Michael J. Clark,Nils Homer,Brian D. O'Connor,Zugen Chen,Ascia Eskin,Hane Lee,Barry Merriman,Stanley F. Nelson

PLOS Genetics, no. 5 (2018)

Bibtex

A global reference for human genetic variation

Altshuler David M.,Durbin Richard M.,Abecasis Goncalo R.,Bentley David R., Chakravarti Aravinda,Clark Andrew G.,Donnelly Peter,Eichler Evan E.,Flicek Paul,Gabriel Stacey B.,Gibbs Richard A.,Green Eric D.

NATURE, no. 7571 (2015): 68-+

Cited by2788Bibtex

An integrated map of genetic variation from 1,092 human genomes

NATURE, no. 7422 (2012): 56-65

Cited by5419Bibtex

Improved variant discovery through local re-alignment of short-read next-generation sequencing data using SRMA

Nils Homer,Stanley F Nelson

Genome biology, no. 10 (2010): R99-R99

Cited by76WOSBibtex

A survey of sequence alignment algorithms for next-generation sequencing

Heng Li,Nils Homer

BRIEFINGS IN BIOINFORMATICS, no. SP5 (2010): 473-483

Cited by823WOSEIBibtex

Local alignment of generalized k-base encoded DNA sequence

Nils Homer,Stanley F Nelson,Barry Merriman

BMC Bioinformatics, no. 1 (2010): 347-347

Cited by54WOSEIBibtex

BFAST: an alignment tool for large scale genome resequencing

Nils Homer,Barry Merriman,Stanley F Nelson

PloS one, no. 11 (2009): e7767-e7767

Cited by579WOSBibtex

The Sequence Alignment/Map format and SAMtools

Li Heng,Handsaker Bob,Wysoker Alec,Fennell Tim,Ruan Jue,Homer Nils,Marth Gabor,Abecasis Goncalo,Durbin Richard, Null Null

Bioinformatics, no. 16 (2009): 2078-2079

Cited by18016WOSEISCOPUSBibtex

Statistical Comparison Framework and Visualization Scheme for Ranking-Based Algorithms in High-Throughput Genome-Wide Studies

Waibhav D. Tembe,John V. Pearson,Nils Homer,James Lowey,Edward Suh,David W. Craig

Journal of Computational Biology, no. 4 (2009): 565-577

Cited by2EIWOSBibtex

Improving the efficiency of genomic loci capture using oligonucleotide arrays for high throughput resequencing

Hane Lee,Brian D O'Connor,Barry Merriman,Vincent A Funari,Nils Homer,Zugen Chen,Daniel H Cohn,Stanley F Nelson

BMC genomics, no. 1 (2009): 646-646

Cited by43WOSBibtex

Local alignment of two-base encoded DNA sequence

Nils Homer,Barry Merriman,Stanley F Nelson

BMC Bioinformatics, no. 1 (2009): 175-175

Cited by102WOSEIBibtex

A genome-wide analysis identifies genetic variants in the RELN gene associated with otosclerosis

Isabelle Schrauwen,Megan Ealy,Matthew J Huentelman,Melissa Thys,Nils Homer,Kathleen Vanderstraeten,Erik Fransen,Jason J Corneveaux,David W Craig,Mireille Claustres,Cor W R J Cremers,Ingeborg Dhooge

AMERICAN JOURNAL OF HUMAN GENETICS, no. 3 (2009): 328-338

Cited by54WOSEIBibtex

Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays

Nils Homer,Szabolcs Szelinger,Margot Redman,David Duggan,Waibhav Tembe,Jill Muehling,John V Pearson,Dietrich A Stephan,Stanley F Nelson,David W Craig

PLoS genetics, no. 8 (2008): e1000167-e1000167

Cited by759WOSBibtex

Identification of genetic variants using bar-coded multiplexed sequencing

David W Craig,John V Pearson,Szabolcs Szelinger,Aswin Sekar,Margot Redman,Jason J Corneveaux,Traci L Pawlowski,Trisha Laub,Gary Nunn,Dietrich A Stephan,Nils Homer,Matthew J Huentelman

Nature Methods, no. 10 (2008): 887-893

Cited by318WOSNATUREBibtex

Multimarker analysis and imputation of multiple platform pooling-based genome-wide association studies

Nils Homer,Waibhav D Tembe,Szabolcs Szelinger,Margot Redman,Dietrich A Stephan,John V Pearson,Stanley F Nelson,David Craig

Bioinformatics, no. 17 (2008): 1896-1902

Cited by24WOSEIBibtex

Common sequence variants on 20q11.22 confer melanoma susceptibility

Kevin M Brown,Stuart MacGregor,Grant W Montgomery,David W Craig,Zhen Zhen Zhao,Kelly Iyadurai,Anjali K Henders,Nils Homer,Megan J Campbell,Mitchell Stark,Shane Thomas,Helen Schmid

Nature Genetics, no. 7 (2008): 838-840

Cited by245WOSNATUREBibtex

Analysis Software for High-density Pooled Genotyping Data

Waibhav Tembe,Nils Homer,Sotiris Mitropanopoulos,Mitchell Storey,Szabolcs Szelinger,Marcel Brun,Matthew J. Huentelman,Edward Suh,Dietrich A. Stephan,James Lowey,John Pearson,David W. Craig

BIOCOMP, pp.188-194, (2007)

Cited by1EIBibtex

Identification of the Genetic Basis for Complex Disorders by Use of Pooling-Based Genomewide Single-Nucleotide–Polymorphism Association Studies

John V. Pearson,Matthew J. Huentelman,Rebecca F. Halperin,Waibhav D. Tembe,Stacey Melquist,Nils Homer,Marcel Brun,Szabolcs Szelinger,Keith D. Coon,Victoria L. Zismann,Jennifer A. Webster,Thomas Beach

AMERICAN JOURNAL OF HUMAN GENETICS, no. 1 (2007): 126-139

Cited by167EIWOSBibtex

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