Carolina M. Barra

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MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer

Hanqing Liao,Carolina Barra,Zhicheng Zhou,Xu Peng,Isaac Woodhouse,Arun Tailor,Robert Parker,Alexia Carré,Persephone Borrow,Michael J. Hogan,Wayne Paes,Laurence C. Eisenlohr,

Nature Communicationsno. 1 (2024): 1-16

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New light on the HLA-DR immunopeptidomic landscape

Emilie Egholm Bruun Jensen,Birkir Reynisson,Carolina Barra,Morten Nielsen

Journal of leukocyte biology (2024)

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IMPROVE: a feature model to predict neoepitope immunogenicity through broad-scale validation of T-cell recognition

Annie Borch, Ibel Carri,Birkir Reynisson, Heli M Garcia Alvarez, Kamilla K Munk, Alessandro Montemurro,Nikolaj Pagh Kristensen, Siri A Tvingsholm, Jeppe Sejerø Holm,Christina Heeke, Keith Henry Moss, Ulla Kring Hansen,

Frontiers in immunology (2024): 1360281-1360281

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Integration of HLA-DR linkage disequilibrium to MHC class II predictions

Mogens Theisen Pedersen, Sarah Rosenberg Asmussen, Freja Malou Sarfelt, Astrid Saksager,Peter Wad Sackett,Morten Nielsen,Carolina Barra

bioRxiv (Cold Spring Harbor Laboratory) (2023)

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Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome

Jonas Birkelund Nilsson,Saghar Kaabinejadian,Hooman Yari,Bjoern Peters,Carolina Barra,Loren Gragert,William Hildebrand,Morten Nielsen

Communications biologyno. 1 (2023): 442-442

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NetAllergen, a random forest model integrating MHC-II presentation propensity for improved allergenicity prediction

Yuchen Li,Peter Wad Sackett,Morten Nielsen,Carolina Barra

BIOINFORMATICS ADVANCESno. 1 (2023): vbad151-vbad151

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Neoepitope load, T cell signatures and PD-L2 as combined biomarker strategy for response to checkpoint inhibition immunotherapy

Annie Borch,Anne-Mette Bjerregaard, Vinicius Araujo Barbosa de Lima,Olga Østrup,Christina Westmose Yde,Aron Charles Eklund,Morten Mau-Sørensen,Carolina Barra,Inge Marie Svane,Finn Cilius Nielsen,Samuel A Funt,Ulrik Lassen,

Frontiers in genetics (2023): 1058605

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Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome by accurate and comprehensive HLA-DQ antigen presentation prediction

Jonas Birkelund Nilsson,Saghar Kaabinejadian,Hooman Yari,Bjoern Peters,Carolina Barra,Loren Gragert,William H. Hildebrand,Morten Nielsen

bioRxiv (Cold Spring Harbor Laboratory) (2022)

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Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome by accurate and comprehensive HLA-DQ antigen presentation prediction

Jonas Birkelund Nilsson,Saghar Kaabinejadian,Hooman Yari,Bjoern Peters,Carolina Barra,Loren Gragert,William Hildebrand,Morten Nielsen

biorxiv（2022）

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MARS: Improved De Novo Peptide Candidate Selection for Non-Canonical Antigen Target Discovery in Cancer

Hanqing Liao,Carolina Barra,Xu Peng,Isaac Woodhouse, Arun Tailor,Robert Parker,Alexia Carré,Roberto Mallone,Michael Hogan,Wayne Paes,Laurence Eisenlohr, Morten Nielsen,

Research Square (Research Square) (2022)

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论文共 41 篇作者统计合作学者相似作者