Dr. McDougle was elected to the American College of Neuropsychopharmacology in 1995, and is now a fellow. He was twice chosen as Teacher of the Year by the Yale Psychiatry Residents. In 2002, Dr. McDougle was selected as a recipient of the 12th Annual Nancy C.A. Roeske, M.D. Certificate of Recognition for Excellence in Medical Student Education from the American Psychiatric Association, and in 2007 he was selected as a recipient of the Annual Irma Bland Award for Excellence in Teaching Residents, also by the American Psychiatric Association. Dr. McDougle was awarded the Frank J. Menolascino Award from the American Psychiatric Association in 2009 and the George Tarjan Award from the American Academy of Child and Adolescent Psychiatry in 2012. In 2003, he was appointed Associate Editor of the Journal of Autism and Developmental Disorders.